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Detailed information on CNT30485914


BLAST search results

BLAST vs Swiss-Prot:
sp|Q07473|CB4A_ARATH, E-value = 8e-144

BLAST vs NONCODE:
NONPOPT000803, E-value = 8e-31

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695034Olea europaeaOryza sativa17.9822.7583.33144forward
CNT30520570Olea europaeaSetaria italica33.9627.8179.41272forward
CNT30640553Olea europaeaNymphaea colorata35.2135.0380.5282forward
CNT30513329Olea europaeaJuglans regia34.4642.9982.97276forward
CNT30500595Olea europaeaCoffea canephora25.9727.3385.1208forward
CNT30282947Olea europaeaChenopodium quinoa30.2119.8283.88242forward
CNT30382112Olea europaeaManihot esculenta20.4731.1282.93164forward
CNT30401900Olea europaeaBeta vulgaris40.0732.8280.69321forward
CNT30526506Olea europaeaPhaseolus vulgaris40.5727.4383.69325forward
CNT30502928Olea europaeaNicotiana attenuata21.2248.1681.76170forward
CNT30708177Olea europaeaGlycine max39.730.2382.7318forward
CNT30289853Olea europaeaTriticum aestivum33.9634.8380.15272forward
CNT30221234Olea europaeaHordeum vulgare17.4823.3783.57140forward
CNT30562752Olea europaeaActinidia chinensis20.112.7384.47161forward
CNT30587569Olea europaeaMusa acuminata13.1131.3486.67105forward
CNT30144505Olea europaeaMedicago truncatula18.7323.1881.33150forward
CNT30436081Olea europaeaAegilops tauschii20.4732.0979.27164forward
CNT30244332Olea europaeaAvena sativa22.622.2682.32181forward
CNT30262014Olea europaeaBrassica rapa11.8620.787.3795forward
CNT30452520Olea europaeaSaccharum spontaneum33.9618.1579.78272forward
CNT30132393Olea europaeaLolium perenne15.7321.4780.95126forward
CNT30229721Olea europaeaAnanas comosus35.9612.2779.51288forward
CNT3067780Olea europaeaLeersia perrieri12.2320.585.7198forward
CNT30213985Olea europaeaHelianthus annuus19.8529.9486.16159forward
CNT30680618Olea europaeaTriticum urartu34.5828.8280.14277forward
CNT30338963Olea europaeaEragrostis tef17.9821.7281.94144forward
CNT30620949Olea europaeaCajanus cajan40.8230.3982.57327forward
CNT30360911Olea europaeaLactuca sativa23.140.6684.86185forward
CNT30370757Olea europaeaOryza glumipatula17.9830.1983.33144forward
CNT3023899Olea europaeaPopulus trichocarpa30.8437.9481.38247forward
CNT30328621Olea europaeaAsparagus officinalis13.8637.2583.78111forward
CNT30120621Olea europaeaCitrus clementina14.2329.3185.96114forward
CNT30147934Olea europaeaBrachypodium distachyon17.4836.7581.43140forward
CNT30580858Olea europaeaEchinochloa crusgalli18.2324.784.93146forward
CNT30604352Olea europaeaOryza punctata17.982584.03144forward
CNT30556500Olea europaeaPanicum hallii15.2320.7581.15122forward
CNT30551395Olea europaeaOryza brachyantha34.0831.5279.12273forward
CNT30725365Olea europaeaLupinus angustifolius39.219.3881.85314forward

Expression of CNT30485914

Peptides detected in this lncRNA

>peptide 1 (82 aa)
MPPSRGGHALSPPVEGWLSSQGRPPNQVDRRSCHQGKVSSRDQARHFSGTQCIQSPGLQSILMWLWRMEVVGQGRRHREWPT*

>peptide 2 (54 aa)
MLYLRQLKGGFLLRVGRQTKWIEEAATRVKSLLGIKLGISLELNVSNHQDFNPY*

>peptide 3 (46 aa)
MDQLALPKPLESKNLTVRLKRCRFNISSLSPGPNNLTRQVLGQVLI*

>peptide 4 (30 aa)
NRIRNRRFQELKRRSRRCPKWLCEEGHSSV*

Sequence

>CNT30485914
AATAGGATAAGAAATCGACGATTTCAGGAGCTTAAGAGAAGAAGCCGAAGGTGTCCAAAATGGTTGTGTGAAGAGGGTCACTCAAGTGTGTAGCCCAGTT
GTTAAGAGGACCTTTGCCGGTGGCGGCAGCCTGGACTGCAAAGCCTAGGAATGCCACCATCGCGAGGCGGGCATGCTTTATCTCCGCCAGTTGAAGGGTG
GCTTTCTTCTCAGGGTCGGCCGCCAAACCAAGTGGATCGAAGAAGCTGCCACCAGGGTAAAGTCTCTTCTCGGGATCAAGCTCGGCATTTCTCTGGAACT
CAATGTATCCAATCACCAGGACTTCAATCCATATTAATGTGGTTATGGAGAATGGAAGTGGTTGGCCAAGGTAGGAGGCACCGAGAGTGGCCAACATAGC
CCACCTGCCATGGATCAGCTCGCACTCCCTAAACCTCTGGAGTCCAAAAACCTCACTGTAAGGCTGAAACGGTGTCGATTTAACATCAGCAGCCTCAGTC
CTGGTCCCAATAATCTCACCCGCCAAGTTCTTGGCCAAGTTCTGATCTAGAGAATCTAAGTCATACTGCAAGTACTCAGCGGGTTTTCCCAGACCAAAAG
GGTCGAAACCATAATCACCGACCAGACTTCCATCGAGCCATTCGGGTGCCTGTGCTCCCGGGAACCACAATGGGCGGTCCGTGGTGACGGACTTTGACAC
TTTCTTGGGTGGAGCTTTCTTTTTTCCGAATCCAAACCGAGCCTGGACACGACCAGATCCGGAGTGAGCCTCATTGAGGCGTGTGCCAATGAAGGAGGAT
G