« Back to Citrullus lanatus search


Detailed information on CNT3019944


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30228106Citrullus lanatusAnanas comosus31.06101.1580.59438forward
CNT30624631Citrullus lanatusDaucus carota7.350.2493.2103forward
CNT30574570Citrullus lanatusVitis vinifera48.5857.6691.97685reverse complement

Expression of CNT3019944

Peptides detected in this lncRNA

>peptide 1 (74 aa)
MVAIQSSGSIVADMITALTHTIVKDRKMEPLNVDVWKMRMLLLLKEQDLFFFILEKREARRSGANGFFNQVMLL*

>peptide 2 (29 aa)
MVGIRLFRPTTIQVMSDSEAKPYKGEQPN*

Sequence

>CNT3019944
CTTCCAAGTCAAGGGCTATCGCTCAAAGGGGCACACAAGGAGAAGTACGAGAAATGAAAGAAAGGTGCTTCATGTAAAGTGAGATGAGAAAAGGCCCTGC
GGGATTTTGATGACCGCGAGCAGCAAGCTGATCGCTTTTTTCTCGCTTCCGAGAGGCCAAGGGATTGGATTTCACCTATGATCAGATCAGTGGGCTACCA
TAGTTTACTTTTTTCGTGGTGTTGTTGAAAGCGAATTTGGAAGTAGGCCTCGCTTTTCGGAGCAGCTCCCAGCTCACACTATGGTGGAGGAGGTGCCGTG
AAGATCTAGGAGTGTGAGCAGTACGAGCTGAAAGGCTCCCATACTGTTTGGAGGGCAGGGGGCATAGATGCCAAACAAACCTGACCCCTATCTATCGTCG
TAGAAGCAGTTCCTAGGAAAGATTATGGTTCTCGGGTATCCAATCAATTAATCCCCCAAACCGGGGAAGCTTAAGCGGAAATGAAAGGGTAGGGTGAGGG
ATAAGGGGGGAAGCCCCTAAATTGAAGGCTTCGCTCGCTCGCTCTAACGCTCGTTTATACGACAGCGAGTGGAGTGCATAAGCCCCTTTAGAGATAGGGG
CGAGTACTACACGAGCTCGTAAGTCAAGTACGGAACGAGCCTTGTCTACGAACTTTAGAGATAGGGGCGACCTCGTCTTGCTTGCTTCTGGCGAAGCTTA
ACGCACTAGATAATCGGCATTATTTTATGGTAGGAATACGACTTTTTAGGCCGACCACAATACAAGTCATGAGCGATAGCGAAGCCAAGCCGTATAAAGG
CGAGCAGCCCAACTAGCAATAGCAACACACGTCGAAGAAATCCGTTGTCTAGAGAGAGTGGAGTGATCTCAAAGAGTTTTCGATTTTCATATTTCAAACG
TCGACTTTGATATAAATATCAATATATATATAGTTTTTCGAATCAAATCAAACGAGATTTCTCATTTGCTGCCACTCAACAACAGCAGGTCTCAGCTCTG
CACATTCCTAGAAATTTTTTCTTTCTTTCAGCTAAAGATTGTTATCATCTGGTATGAGAGTCCAGGTTATGCAGATATGGTAGCGATACAATCTTCTGGA
TCTATAGTTGCTGATATGATTACAGCATTAACGCATACGATTGTCAAGGATCGCAAAATGGAACCTCTAAATGTAGATGTTTGGAAGATGAGAATGCTGT
TGCTTCTCAAAGAACAGGATCTTTTTTTTTTCATTCTTGAGAAAAGAGAAGCCCGCAGATCTGGCGCTAATGGCTTCTTCAATCAAGTGATGTTGTTGTA
GCCAAACAACAAAAGAAAGCATATGAACAGCATCGATAGTTGTAGACAATAAAAAAAAAGTTCTTCGAAGCTGTGCTAATGGTGGTCAAGGATAAGGTAC
TAGTTTCAGT