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Detailed information on CNT3036478


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639844Cucumis meloNymphaea colorata58.4280.2996.511776forward
CNT30317976Cucumis meloCorylus avellana58.5576.6698.261780forward
CNT30519047Cucumis meloJuglans regia58.4991.9898.031778forward
CNT30702609Cucumis meloQuercus lobata58.1996.1497.851769forward
CNT30283192Cucumis meloChenopodium quinoa58.5284.4797.191779reverse complement
CNT3021658Cucumis meloCitrullus lanatus58.0399.3899.721764reverse complement
CNT30628671Cucumis meloVigna unguiculata58.4560.7997.691777reverse complement
CNT30200773Cucumis meloPisum sativum58.3960.4297.581775forward
CNT30506608Cucumis meloNicotiana attenuata58.5269.2295.841779forward
CNT3048153Cucumis meloPrunus dulcis58.5242.8897.581779forward
CNT30638988Cucumis meloCapsicum annuum57.892.2397.671757reverse complement
CNT30544406Cucumis meloBrassica napus58.4589.1697.191777forward
CNT30309594Cucumis meloCamelina sativa58.4291.9397.131776reverse complement
CNT3083352Cucumis meloBrassica juncea58.4596.7997.191777reverse complement
CNT30261808Cucumis meloBrassica rapa53.7878.2397.551635forward
CNT30422282Cucumis meloPapaver somniferum58.6256.4696.81782reverse complement
CNT3025914Cucumis meloPopulus trichocarpa57.9698.2298.071762forward
CNT30326143Cucumis meloAsparagus officinalis58.4557.6997.361777forward
CNT30115267Cucumis meloEutrema salsugineum58.4994.2296.231778forward

Expression of CNT3036478

Peptides detected in this lncRNA

>peptide 1 (44 aa)
MKFQRLPGPVGQGYRLVEYISVARVRPRTSKGITDLLLPQTSLA*

>peptide 2 (48 aa)
MIRFSGLLATSRAANRPRRRDPNTSPDHSIGRSDGRCVQRGRDVVNAS*

>peptide 3 (44 aa)
MHPFQKSGFVARISSRITTVIRVANTIKQTITDLMSHSQFHSLN*

>peptide 4 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPVNHYSDPEGQQNRIEIL*

>peptide 5 (95 aa)
MSKGNTFRGTYHATECTASERASADDAARNDNRRCQGGTRCGLSGSLSTQRWVSTERGQRDASLPSREVPMQEPIDCDRSNSSFVRGTSMRWSRR*

>peptide 6 (49 aa)
MPTPNGIGAIRGASVIRSSNEQRQHVSRDLSCHRMHCIRESERRRRGPQ*

>peptide 7 (78 aa)
MPPNALHPRERAPTTRPAMTTEDVKAERDAGYRVRCPPKDGCQQKGANGTRRFHRVRYRCKNRSIVTARTQALFGARQ*

>peptide 8 (41 aa)
MRRTHRARATLGYPRPYVALKQAGLQSRRARPSTERRARSI*

>peptide 9 (44 aa)
MAKPLHQARSNCKTSPLGVHAHTEVQALSKHAHPALTPCPTVGCG

>peptide 10 (33 aa)
MSRRNAMRAIGFVVHPKMGVNRKGPTGRVASIA*

>peptide 11 (30 aa)
MMRRRHDGRAIRRVIMNHQSNGQSPRRPFI*

>peptide 12 (39 aa)
MTTGRINQVAFLHDVTARMHANAKRHWSNTGSERHSFEQ*

>peptide 13 (38 aa)
LRLLLPLNDKVQWTSRDVAGSEPPTSPRSKHFTGPFNR*

>peptide 14 (35 aa)
MPEQRACQPKLPYHHSCAVRIEPVQRLAIRALTLH*

>peptide 15 (32 aa)
MKYECPRLSLLIITPIPKANRIGSKSYDVIPC*

>peptide 16 (32 aa)
MPRTRPQRGASIIQASPTPTSTAHPALYPRPT*

Sequence

>CNT3036478
CTACGACTTCTCCTTCCTCTAAATGATAAGGTTCAGTGGACTTCTCGCGACGTCGCGGGCAGCGAACCGCCCACGTCGCCGCGATCCAAACACTTCACCG
GACCATTCAATCGGTAGGAGCGACGGACGGTGTGTACAAAGGGGCAGGGACGTAGTCAACGCGAGCTGATGACTCGCGCTTACTAGGAATTCCTCGTTGA
AGACCAACAATTGCAATGATCTATCCCCATCACGATGAAATTTCAAAGATTACCCGGGCCTGTCGGCCAAGGCTATAGACTCGTTGAATACATCAGTGTA
GCGCGCGTGCGGCCCAGAACATCTAAGGGCATCACAGACCTGTTATTGCCTCAAACTTCCTTGGCCTAAGCGGCCATAGTCCCTCTAAGAAGCTGGCCGC
GGAGGGGTACCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAATTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACC
ACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTACTATGTCTGGACCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTC
CACTCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATACTCCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCTGGC
GGAGTCCTTAAAGCAACATCCGCCAATCCCTGGTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTT
GATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTG
TCCCTGTTAATCATTACTCCGATCCCGAAGGCCAACAGAATAGGATCGAAATCCTATGATGTTATCCCATGCTAATGTATACAGAGCGTAGGCTTGCTTT
GAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAGTTAAGGCCAGGAGCGCATCGCCGGCAGAAGGGACGAGCCGACCGGTGCT
CACCATAGGCGGACCGATCGACCCAACCCAAGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCT
GCTGGCACCAGACTTGCCCTCCAATTGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACTCGAAGAGCCCGGTATTGTTATTTATTG
TCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTA
ATTCTCCGTCACCCGTCACCACCATAGTAGGCCACTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGATGGCCGTG
CGATCCGTCGAGTTATCATGAATCATCAGAGCAACGGGCAGAGCCCGCGTCGACCTTTTATCTAATAAATGCATCCCTTCCAGAAGTCGGGGTTTGTTGC
ACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCAAATACCATCAAACAAACTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTCTGAAT
TAGTTCATACTTACACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCATTCCTACACGACGTCACAGCCCGCA
TGCATGCCAACGCCAAACGGCATTGGAGCAATACGGGGAGCGAGCGTCATTCGTTCGAGCAATGAGCAAAGGCAACACGTTTCGAGGGACTTATCATGCC
ACCGAATGCACTGCATCCGAGAGAGCGAGCGCCGACGACGCGGCCCGCAATGACAACCGAAGATGTCAAGGCGGAACGCGATGCGGGCTATCGGGTTCGT
TGTCCACCCAAAGATGGGTGTCAACAGAAAGGGGCCAACGGGACGCGTCGCTTCCATCGCGTGAGGTACCGATGCAAGAACCGATCGATTGTGACCGCTC
GAACTCAAGCTTTGTTCGGGGCACGTCAATGAGGTGGAGCCGACGTTGACAGTTCGATGCCCGAGCAACGAGCCTGCCAACCCAAACTACCGTATCACCA
CTCATGCGCCGTACGCATCGAGCCCGTGCAACGCTTGGCTATCCGCGCCCTTACGTTGCATTAAAGCAAGCAGGGCTGCAGAGTCGCCGCGCGAGGCCGA
GCACGGAACGTCGTGCGCGCTCGATATGAGCATTGTGTAACCCACGTGAACATTGCAACCGAAACACCGTCATTGTTATGGGACGAGCCCTTTCGTCAAA
CGGAGATCGATTGCAGCACGTTTAGTCTCGACAGAGGAAAGCATGCCGAGAACACGCCCGCAACGAGGTGCAAGCATTATCCAAGCAAGCCCAACCCCCA
CCTCGACCGCACATCCTGCTCTCTATCCCCGCCCGACGTAGGGGCGTAAAGGGCACCCACCAAACCCTTCCACCAAGCAAGAAGCAATCACAAGACATCT
CGTATCTTCACGAACAAGCCCGCTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTC
ACTCCCCGCCCAACGGTCGGACGTGGCACTCCGACGAAACCCGTCCATCGAGCACAAAGCAATCGCAAGACATCTCGTATCTTCACGAACAAGCCCGCTT
GGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCGCGCAAGCCCATCCGAGCATCAACTCGACACCCGCTCTCACTCCCTACCCGACGGACAAGCCCA
TCGTTATGGCCAAACCCCTCCACCAAGCACGAAGCAATTGCAAGACAAGCCCACTTGGAGTGCACGCCCACACCGAGGTGCAAGCATTGTCCAAGCACGC
CCATCCCGCTCTCACTCCTTGCCCGACGGTCGGATGTGGC