Detailed information on CNT30711221


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30640023Glycine maxNymphaea colorata98.4639.8994.941345reverse complement
CNT30550233Glycine maxIpomoea triloba98.947.9297.191351forward
CNT30619307Glycine maxSesamum indicum92.7575.6495.031267forward
CNT30730599Glycine maxCorchorus capsularis77.697.7997.261060forward
CNT30507933Glycine maxNicotiana attenuata100.0767.2497.371367forward
CNT30163337Glycine maxPistacia vera94.9593.7195.141297forward
CNT30383474Glycine maxTriticum turgidum100.0781.0393.861367forward
CNT30545324Glycine maxBrassica napus100.1578.894.371368reverse complement
CNT30311297Glycine maxCamelina sativa100.0767.8795.11367forward
CNT30217525Glycine maxKalanchoe fedtschenkoi100.0776.292.761367forward
CNT30355986Glycine maxLactuca sativa100.2950.1892.631370forward
CNT30433935Glycine maxPapaver somniferum100.5173.0795.561373forward
CNT30574469Glycine maxVitis vinifera88.866.1897.281213forward
CNT30176196Glycine maxVigna angularis89.7581.5798.371226reverse complement

Expression of CNT30711221

Peptides detected in this lncRNA

>peptide 1 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGGISGERRPC*

>peptide 2 (32 aa)
LKIRRTECLPRPVVLITASGLQGEQPLVDGTM*

>peptide 3 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWRNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (87 aa)
MEQCRQGKSAKWIRNLGKRIGSEGWARGSQSRTRRLSVDCSSCFRGESGSSRAGRGTDWERALRGLFPGRRTVNSELVRTRGIRLFN*

Sequence

>CNT30711221
CTTGAAAATCCGGAGGACCGAGTGCCTCCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAG
GCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGGCTGGGCACGGGGGTCCCAGTCCCGAACCCGTCGGCTGTCGGTG
GACTGCTCGAGCTGCTTCCGCGGCGAGAGCGGGTCGTCGCGTGCCGGTCGGGGGACGGATTGGGAACGGGCCCTTCGGGGCCTCTTCCCCGGGCGTCGAA
CAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCTGCGGATGTTGACGCAATGTGATTTCTG
CCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCT
AATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTTGGCGGAATCAGCGG
GGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGTGTAGGATAAGTGGGAGCTGGAAACAGCGAAAGTGAAATACC
ACTACTTTTAACGTTATTTTACTTATTCCGTGAATCGGAAGCGGGGCACTGCCCCTCTTTTGGACCCAAGGTCGGCTTCGGCCGGTCGATCCGGGCGGAA
GACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGA
ACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGTCCTTCGGAATTTGAAGCTAG
AGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCAT
TGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGA
TGACAGTGTCGCAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTAC
CGTGCGTTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGCGACGCGTGCGCCCG