Detailed information on CNT30531005


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONATHT002216, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519432Eucalyptus grandisJuglans regia45.996.9696.871629forward
CNT3072574Eucalyptus grandisQuercus suber32.7759.4397.421163forward
CNT3075702Eucalyptus grandisBrassica juncea45.994.3396.261629forward
CNT30628180Eucalyptus grandisDaucus carota33.7893.1696.251199reverse complement
CNT30369024Eucalyptus grandisSorghum bicolor43.3410094.931538forward
CNT30422894Eucalyptus grandisPapaver somniferum46.1574.5996.761638forward

Expression of CNT30531005

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRIAVAAQARAFDTSVETSPLRLWNAARASRRASASACSRHRLVGSPFGPS*

>peptide 2 (47 aa)
MGGGAWPFLVGGAICLVNSDNERDLSLLTSYVDVHLHGQLLRGTMAA*

>peptide 3 (89 aa)
MKNVANCDTWCELQNPVNHRVFERKLRPKPLVEGTFAWVSRMALPPIPSALSTGRAGLGRVRWPPATTTSRLAQNRASERSAPRHSVVD*

>peptide 4 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 5 (44 aa)
MLPPPHTRCARGMPCNLILLITTLGNGYLGSRIDEERSELRYLV*

>peptide 6 (39 aa)
MSRVPLIARSANLLLTNATPGQAGLPAEFKHINKRRKRN*

>peptide 7 (45 aa)
MDRCGLQWRPKPGPSIRPWKRRHCDCGMQHAPHGVLRHLRAPGIG*

>peptide 8 (44 aa)
MHLLDKRSTRALPVALMIHDNLTDRTAIVPATHHSNFCPINFRW*

>peptide 9 (36 aa)
MNRKSSYGAQLRANLEPTKGVGRLRQQTVVMEVEIR*

>peptide 10 (33 aa)
MPTRDRRMLLLGLRRHLMRNQSFWVPGGVWSQG*

>peptide 11 (93 aa)
MCLGRMWNGESRSADRLEAWTDADCSGGPSPGLRYVRGNVATAIVECSTRLTACFGICVLQASASGLPIRPVLKHGPRSLTCVRVNGWQTRKA*

>peptide 12 (32 aa)
VDPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 13 (33 aa)
MRIDRPRRSNCSLEKRPQRRTGPKFPGRGRQRG*

>peptide 14 (29 aa)
MINVARAAHRALRESAPYQRDPRSSGATR*

Sequence

>CNT30531005
TGGTTGATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTA
AATCAGTTATAGTTTGTTTGATGGTATTTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTTTGGAAGGGATGCAT
TTATTAGATAAAAGGTCGACGCGGGCTTTGCCCGTTGCTCTGATGATTCATGATAACTTGACGGATCGCACGGCCATCGTGCCGGCGACGCATCATTCAA
ATTTCTGCCCTATCAACTTTCGATGGTAGGATAGTGGCCTACTATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAA
ACGGCTACCACATCCAAGGAAGGCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGACCTTGG
GTTGGGTCGACCGGTCCGCCTCACGGTGTGCACCGATTGGCTCGTCCCTTCTACCGGCGATACGCTCCTGGCCTTAACTGGCCGGGTCGTGCCTCCGGTG
CTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGTATACATTAGCATGGGATAACATCATAGGATTCCGGTCCTATTGTGTTGGCCT
TCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACTGCGAAA
GCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAACGATGCCGACTAGG
GATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGGGAGTATGGTCGCAAGGCTGAAACTTAAAGG
AATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGTCCAGACATAGTAAGGATTGACAGACTG
AGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGATAACGAACGAGACCTCAGCCTG
CTAACTAGCTATGTGGATGTACATCTCCACGGCCAGCTTCTTAGAGGGACTATGGCCGCTTAGGCCAAGGAAGTTTGAGGCAATAACAGGTCTGTGATGC
CCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGTATTCAACGAGTCTATAGCCTTGGCCGACAGGCCTGGGTAATCTTTGAAATTTCATCGTGAT
GGGGATAGATCATTGCAATTGTTGGTCTTCAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCG
CCCGTCGCTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGTGCGCGGTTCGCCGCCGATGACGTCGCGAGAAGTCCACTGAACGTT
ATCATTTAGAGGAAGGAGAAGTCGTAACAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAATCCTGCCCAGCAGAACGATCAGAGAACCGGT
AACAAACTCAACGGGGACGGCGGGCTCAGCCCGACGTCCCTATCGACGCCGGGGATCGGGGTCGGGCTCCTCAGGGCGCTCGGTCCTTGTCCTCGGCGGC
GCAACGAACCCCGGCGCGGAATGCGCCAAGGAACTTGAACAAGAGTGCGATGCTCCCGCCGCCCCATACACGGTGCGCGCGCGGGATGCCATGCAATCTC
ATATTACTCATAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAACTGCGATACTTGGTGTGAATTGCAGAATCCCGTG
AACCATCGAGTCTTTGAACGCAAGTTGCGCCCGAAACCTTTGGTCGAGGGCACGTTTGCCTGGGTGTCACGCATGGCGTTGCCCCCAATCCCCTCCGCCC
TTTCAACGGGGCGAGCGGGACTCGGGCGCGTACGATGGCCTCCCGCGACGACCACGTCCCGGTTGGCCCAAAATCGAGCGTCGGAGCGATCAGCACCACG
ACATTCGGTGGTTGATTAGACCCCAATGATCAATGTCGCGCGTGCCGCTCATCGCGCGCTCCGCGAATCTGCTCCTTACCAACGCGACCCCAGGTCAAGC
GGGGCTACCCGCTGAGTTTAAGCATATCAATAAGCGGAGGAAAAGAAACTAACAAGGATTCCCCTAGTAACGGCGAGCGAACCGGGAAGAGCCCAGCATG
AGAATCGATCGCCCTCGGCGTTCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGACGGACCGGGCCCAAGTTCCCTGGAAGGGGGCGCCAGAGAGGGTGAG
AGCCCCGTCGTGTCCGGACCCTGTCGCACCACGAGGCACTGTCGGCGAGTCGGGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGG
CTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGAAAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGG
GAAGCGGATGGGGGCCGGCGATGTGCCTCGGTCGGATGTGGAACGGTGAGAGCCGGTCCGCCGATCGACTCGAGGCATGGACCGATGCGGATTGCAGTGG
CGGCCCAAGCCCGGGCCTTCGATACGTCCGTGGAAACGTCGCCACTGCGATTGTGGAATGCAGCACGCGCCTCACGGCGTGCTTCGGCATCTGCGTGCTC
CAGGCATCGGCTAGTGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAAGGAGTCTGACATGTGTGCGAGTCAATGGGTGGCAAACCCGTAAGGCGT
AAGGAAGCTGATTGGTGGGATCCCTTTTGGGTGCACCGCCGACCGACCTTGATCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAG
ATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGG
GCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGATAGCTGGAGCTCAAGAACGAGTTCTATCGGGTAAAGCCAATGATT
AGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGGTAGGACGGCGCGGCTGCTTCGTTGAGCCACGCCACGGAATCGAGAGCTC
CAAGTGGCCATTTTTGGTAAGCAGAACGGCGATGCGGGATGAACCGGAAGTCGAGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGT
TGGTCGATTAAGACAGCAGACGGTGGTCATGGAAGTCGAAATCCGCTAA