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Detailed information on CNT30381277


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30567604Manihot esculentaActinidia chinensis72.8397.5893.651008forward

Expression of CNT30381277

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MSRRARRSLQNLGREPGGAAVGAHLGGSRKYSNENFEGRRGERFHVN

>peptide 2 (76 aa)
LPTSLAYIVPLARGYSPWRPDAVMSTTGRGRHSVLRIFMGRRGRTGHRATCGALPAAGPYLRLSRFQGGRAVKQKR*

>peptide 3 (52 aa)
MCASQRASKPVRRKEADWRDPLEGCTIDRPRSSEKGSSESMPVGTRKMVNYA*

Sequence

>CNT30381277
TTTGCCGACTTCCCTTGCCTACATTGTTCCATTGGCCAGAGGCTATTCACCTTGGAGACCTGATGCAGTTATGAGTACAACCGGGCGTGGGAGGCACTCG
GTCCTCCGGATTTTCATGGGCCGCCGGGGGCGCACCGGACACCGCGCGACGTGCGGTGCTCTTCCAGCCGCTGGACCCTACCTCCGACTGAGTCGTTTCC
AGGGTGGGCGGGCTGTTAAACAGAAAAGATAACTCTTCTCGAGGCCCCCGCCGACGTCAAGCATATCAATAAGCGGAGGAAAAGAAACTTACCAGGATTC
CCCTAGTAACGGTGAGCGAACCGGGAAGAGCCCAGCTTGAGAATCGAGCGCCTTCGGCATCCGAATTGTAGTCTGGAGAAGCGTCCTCAGCGGCGGACCG
GGCCCAAGTCCCCTGGAAGGAGGCACCAGAGAGGGTGAGAGCTCCCTCGTGCCTGGACCCTGTCGCACCACGAGGCACTGTCTGCGAGTTGGGTTGTTTG
GGAATGCATCCCCAATCGGGCGGTAAATTCCGTCCAAGGAGTCTGACATGTGTGCGAGTCAACGGGCGAGTAAACCCGTAAGGCGCAAGGAAGCTGACTG
GCGGGATCCCCTCGAGGGTTGCACCATCGACCGACCTCGATCTTCTGAGAAAGGTTCGAGTGAGAGCATGCCTGTTGGGACCCGAAAGATGGTGAACTAT
GCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGCCCGCAGCAATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAA
TCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTCAGGATAGCTGGAGCTCGGGACGAGTTCTATTGAGTAAAGCCAATGATTAGAGGCATCGAG
GGTGCAACGCCCTCAACCTATTCTCAAACTTTAAATAGATAGGACAGTGTGGCTGCTTCGTTGAGCCGCGCCATGGAATCGAGAGCTCCAAGTGGGCCAT
TTTTTGTAAGCAGAACTGGCGATGTAGGATGAATCGGAAGCCGGATTACGATGCCTAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTA
AGACAGCAGGACGGTGGTCGTAGAAGTCGAAATCCGCTAAGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTTAAGC
GCGCGACCTATACTCGGCCGTTAGGGCAAGAGCCAGGCCCCGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGCGAGCCCGGCGGAGCGG
CCGTCGGTGCACATCTTGGTGGTAGTAGAAAATATTCAAATGAGAACTTTGAAGGCCGAAGAGGAGAAAGGTTCCATGTGAACG