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Detailed information on CNT30163328


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30519190Pistacia veraJuglans regia84.3657.294.021187forward

Expression of CNT30163328

Peptides detected in this lncRNA

>peptide 1 (68 aa)
MDWERPLRGPYPGVEQSTQKWYGQGESDCLIKTKHCDGPGGCSRNVISAQCSECQSEEIQPSAGKRRE*

>peptide 2 (61 aa)
LSFLFNSPATLETAQPEVGSSGRKIPARRMVSGAPPVALENLEDRVPSMPGHTHNRIRFPR*

>peptide 3 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 4 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

Sequence

>CNT30163328
GTTATCTTTTCTATTTAACAGCCCGGCCACCCTAGAAACAGCTCAGCCAGAGGTAGGGTCCAGCGGCCGAAAGATCCCCGCACGTCGCATGGTGTCTGGT
GCACCCCCGGTGGCCCTTGAAAATCTAGAGGATCGAGTGCCATCCATGCCCGGTCATACTCATAACCGCATCAGGTTTCCAAGGTGAACAGCCTCTAGTC
GATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATAGATCCGTAACTTCGGGAAAATGATTGGCTCTGAGGGCTGGGCACAAGGGTCCTAGTCCTGAACC
TGTCGGCTGTCGGTGGACTACTCAAGCTGGTCCTGCGGCGAGAGCGGGTCACCGCGTGTCGGTCGGGGGATGGACTGGGAACGGCCCCTTCGGGGGCCTT
ATCCAGGCGTCGAACAGTCGACTCAGAAGTGGTACGGACAAGGGGAATCTGACTGTTTAATTAAAACAAAGCATTGCGATGGTCCCGGTGGATGCTCACG
TAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGAGTAACTATGACTCTCTTAAGGTAGCCAA
ATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCAGCGAAACCACAGCCAAGGGAACGGGCTT
GGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGGCGAAAGTGAAATACCACTACTTTTAACG
TTATTTTACTTATTCCGTGAATCGGAGGCGGGGCACTGCCCCTCTTTTTGGACCCAAGGCCCGTCTCGGCGGGCCGATCCGGGCGGAAGACATTGTCAGG
TGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAGGTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTGGAACAAAAGGGTAA
AAGCTCGTTTGATTCTGATTTTCAGTACGAATACGAACCGTGAAAGCGTGGCCTATCGATCCTTTAGACCTTCGGAATTTGAAGCTAGAGGTGTCAGAAA
AGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAGCGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAA
TTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGCTGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGGCAGCGTCGT
AATAGTAATTCAACCTAGTACAAGAGGAACCGTTGATTCGCACAATTGGTCATCGCGCTTGGTTGAAAAGCCAATGGCGCGAAGATACCGTGCGCTGGAT
TATGACT