Detailed information on CNT3010382


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000340, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619379Zea maysSesamum indicum83.0899.4991.88776reverse complement
CNT3048154Zea maysPrunus dulcis101.8290.6692.64951reverse complement
CNT30285964Zea maysTriticum aestivum75.860.6797.46708reverse complement
CNT30224448Zea maysHordeum vulgare85.22100.6393.47796reverse complement
CNT30444212Zea maysAegilops tauschii96.7969.4995.24904reverse complement
CNT30206557Zea maysHelianthus annuus88.0138.1192.34822reverse complement
CNT30413997Zea maysPapaver somniferum75.2784.1994.88703reverse complement
CNT3036408Zea maysCucumis melo101.7189.8893.47950reverse complement

Expression of CNT3010382

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAKPSLRS*

>peptide 2 (30 aa)
MENLGSIPEREPEKRLPHPRKAAGAQITQS*

>peptide 3 (35 aa)
CYLVDLARSHMLVSKIKPCMCKYELIRTVKLRMAH*

>peptide 4 (33 aa)
MPSKRESSARVDYVPALCTHRPSLLPIEWSGEVF

Sequence

>CNT3010382
CGTGCTACCTGGTTGATCTTGCCAGGAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAAT
GGCTCATTAAATCAGTTATAGTTTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGA
GGGGCACATTTATTAGATAAAAGGCCGATCCGATGATTCATGATAACTTGACGGATCGCACGGCCTTCGTGCCGGCGACGCATCATTCAAATTTCTGCCC
TATCAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGATGGAGAATTTGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCA
CATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGGAAACTTACCAGGTCCAGACATAGCAAGGATTGACAGACTGAGAGCTC
TTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTTAATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTA
GCTATGCGAAGCCATCCCTCCGTAGTTAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCATGGAAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGA
TGTTCTGGGCCGCACGCGCGCTACACTGATGTATCCAACGAGTATATAGCCTTGGCCGACAGGCCCGGGTAATCTTGGGAAATTTCATCGTGATGGGGAT
AGATCATTGCAATTGTTGGTCTTCAACGAGGAATGCCTAGTAAGCGCGAGTCATCAGCTCGCGTTGACTACGTCCCTGCCCTTTGTACACACCGCCCGTC
GCTCCTACCGATTGAATGGTCCGGTGAAGTGTTC