Detailed information on CNT30532002


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30619307Eucalyptus grandisSesamum indicum41.2289.9793.31507forward
CNT30526827Eucalyptus grandisPhaseolus vulgaris34.6899.7695.981268reverse complement
CNT30507933Eucalyptus grandisNicotiana attenuata54.3897.7995.321988forward
CNT30545324Eucalyptus grandisBrassica napus46.5898.193.61703reverse complement
CNT30217525Eucalyptus grandisKalanchoe fedtschenkoi48.7499.3391.131782forward

Expression of CNT30532002

Peptides detected in this lncRNA

>peptide 1 (51 aa)
MRIAVAAQARAFDTSVETSPLRLWNAPRASRRASASACSRHRLVGSPFGPS*

>peptide 2 (55 aa)
MPRHLISDAHEWINEIPTVPVYYPAKPQPRERAWQNQRGKKTLLSLTLVRLCEMT*

>peptide 3 (93 aa)
MCLGRMWNGESRSADRLEAWTDADCSGGPSPGLRYVRGNVATAIVECTTRLTACFGICVLQASASGLPIRPVLKHGPRSLTCVRVNGWQTRKA*

>peptide 4 (30 aa)
MRADPGGRHCQVGSLAGAAHLLKDNAGVLR*

>peptide 5 (29 aa)
MEQCRRARRSLQNLGCEPGRSSRRCRSWW*

>peptide 6 (29 aa)
MEQCRQGKSAKWIRNLGKRIGSEDWARGS*

>peptide 7 (45 aa)
MDRCGLQWRPKPGPSIRPWKRRHCDCGMHHAPHGVLRHLRAPGIG*

>peptide 8 (40 aa)
MNRKSSYGAQLRANLEPTKGVGRLRQQDGGHGSRNPLRSV*

>peptide 9 (34 aa)
MNGLTRFPLSLSTIQRNHSQGNGLGRISGERRPC*

>peptide 10 (34 aa)
MPLLLELRSAHAGRSGRKTLSGGEFGWGGTSVKR*

Sequence

>CNT30532002
GGTTGTTTGGGAATGCAGCCCTAATCGGGCGGTAAATTCCGTCCAAGGCTAAATATGGGCGAGAGACCGATAGCAAACAAGTACCGCGAGGGAAAGATGA
AAAGGACTTTGAAAAGAGAGTCAAAGAGTGCTTGAAATTGTCGGGAGGGAAGCGGATGGGGGCCGGCGATGTGCCTCGGTCGGATGTGGAACGGTGAGAG
CCGGTCCGCCGATCGACTCGAGGCATGGACCGATGCGGATTGCAGTGGCGGCCCAAGCCCGGGCCTTCGATACGTCCGTGGAAACGTCGCCACTGCGATT
GTGGAATGCACCACGCGCCTCACGGCGTGCTTCGGCATCTGCGTGCTCCAGGCATCGGCTAGTGGGCTCCCCATTCGGCCCGTCTTGAAACACGGACCAA
GGAGTCTGACATGTGTGCGAGTCAATGGGTGGCAAACCCGTAAGGCGTAAGGAAGCTGATTGGTGGGATCCCTTTTGGGTGCACCGCCGACCGACCTTGA
TCTTCTGAGAAGGGTTCGAGTGAGAGCATGCCTGTCGGGACCCGAAAGATGGTGAACTATGCCTGAGCGGGGCGAAGCCAGAGGAAACTCTGGTGGAGGC
CCGCAGCGATACTGACGTGCAAATCGTTCGTCTGACTTGGGTATAGGGGCGAAAGACTAATCGAACCGTCTAGTAGCTGGTTCCCTCCGAAGTTTCCCTC
AGGATAGCTGGAGCTCAAGAACGAGTTCTATCGGGTAAAGCCAATGATTAGAGGCATCGGGGGCGCAACGCCCTCGACCTATTCTCAAACTTTAAATAGG
TAGGACGGCGCGGCTGCTTCGTTGAGCCACGCCACGGAATCGAGAGCTCCAAGTGGGCCATTTTTGGTAAGCAGAACTGGCGATGCGGGATGAACCGGAA
GTCGAGTTACGGTGCCCAACTGCGCGCTAACCTAGAACCCACAAAGGGTGTTGGTCGATTAAGACAGCAGGACGGTGGTCATGGAAGTCGAAATCCGCTA
AGGAGTGTGTAACAACTCACCTGCCGAATCAACTAGCCCCGAAAATGGATGGCGCTGAAGCGCGCGACCTATACTCGGCCGTCAAGGCAAGTGCCAGGCC
TTGATGAGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGCGTGAGCCCGGGCGGAGCGGCCGTCGGTGCAGATCTTGGTGGTAGTAGCAAATATTCA
AATGAGAACTTTGAAGACCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGTACATGGGTTAGTCGATCCTAAGAGACGGGGGAAGCCCGTCTGATAG
CGCCTCGTGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCCGGAGACGTCGGCGGGG
GCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCAGCGGCTGGAAGAGCACCGCACGTCGC
GTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCTGGAGGACCGAGTGCCGTCCACGCCCGGTCGTACTCATAACCGCATCAGGTCTCCAAGGTGAA
CAGCCTCTGGTCGATGGAACAATGTAGGAGGGCGCGGCGGTCGCTGCAAAACCTGGGGTGTGAGCCCGGGCGGAGCAGCCGTCGGTGCAGATCTTGGTGG
TAGTAGCAAATATTCAAATGAGAACTTTGAAGACCGAAGAGGGGAAAGGTTCCATGTGAACGGCACTTGTACATGGGTTAGTCGATCCTAAGAGACGGGG
GAAGCCCGTCTGATAGCGCCTCGTGCGCGAGCTTCGAAAGGGAATCGGGTTAAAATTCCTGAACCGGGACGTGGCGGTTGACGGCAACGTTAGGGAGTCC
GGAGACGTCGGCGGGGGCCTCGGGAAGAGTTATCTTTTCTGTTTAACAGCCTGCCCACCCTGGAAACGGCTCAGCCGGAGGTAGGGTCCCGCGGCTGGAA
GAGCACCGCACGTCGCGTGGTGTCCGGTGCGCCCCCGGCGGCCCTTGAAAATCTGGAGGACCGAGTGCCGTCCACGCCCGGTCGTACTCATAACCGCATC
AGGTCTCCAAGGTGAACAGCCTCTGGTCGATGGAACAATGTAGGCAAGGGAAGTCGGCAAAATGGATCCGTAACCTCGGGAAAAGGATTGGCTCTGAGGA
CTGGGCACGGGGGTCCTAATCCCGAACCCGTCGGCTGTCGGTGGACTGCTCGAGCTGCTCTCGCGGCGAGAGCGGGTCGCCGCGTGCCGGCCGGGGGACG
GATTAGGAACGGCTCCTTCGGGGGCCTTCCTCGGGCGTCGAACAGTCAACTCAGAACTGGTACGGACAAGGGGAATCCGACTGTTTAATTAAAACAAAGC
ATTGCGATGGTCCCTGCGGATGCTCACGCAATGTGATTTCTGCCCAGTGCTCTGAATGTCAAAGTGAAGAAATTCAACCAAGCGCGGGTAAACGGCGGGA
GTAACTATGACTCTCTTAAGGTAGCCAAATGCCTCGTCATCTAATTAGTGACGCGCATGAATGGATTAACGAGATTCCCACTGTCCCTGTCTACTATCCA
GCGAAACCACAGCCAAGGGAACGGGCTTGGCAGAATCAGCGGGGAAAGAAGACCCTGTTGAGCTTGACTCTAGTCCGACTTTGTGAAATGACTTGAGAGG
TGTAGGATAAGTGGGAGCCGGAAACGGCGAAAGTGAAATACCACTACTTTTAACGTTATTTTACTTATTCCGTGAAACGGAGGCGGGGCAATGCCCCTTC
TTTTAGAACTAAGGTCCGCGCATGCGGGCCGATCCGGGCGGAAGACATTGTCAGGTGGGGAGTTTGGCTGGGGCGGCACATCTGTTAAAAGATAACGCAG
GTGTCCTAAGATGAGCTCAACGAGAACAGAAATCTCGTGTAGAACAAAAGGGTAAAAGCTCGTTTGATTCTGATTTCCAGTACGAATACGAACCGTGAAA
GCGTGGCCTATCGATCCTTTAGATCTTCGGAATTTGAAGCTAGAGGTGTCAGAAAAGTTACCACAGGGATAACTGGCTTGTGGCAGCCAAGCGTTCATAG
CGACGTTGCTTTTTGATCCTTCGATGTCGGCTCTTCCTATCATTGTGAAGCAGAATTCACCAAGTGTTGGATTGTTCACCCACCAATAGGGAACGTGAGC
TGGGTTTAGACCGTCGTGAGACAGGTTAGTTTTACCCTACTGATGATAGTGTCACAATAGTAATTCAACCTAGTACGAGAGGAACCGTTGATTCGCACAA
TTGGTCATCGCGCTTGGTTGAAAAGCCAGTGGCGCGAAGCTACCGTGCGCTGGATTATGACTGAACGCCTCTAAGTCAGAATCCGGGCTAGAAGTGACGC
ATAAGCTCGCCGCTCGATTGCCGACCTGCAGTAGGGGACTTGTTCCCCCAAGGGCACGTGTCGTTGGTGAAGCTCTCGCGGTGGATGAACCGCGTGGGCC
GCCTTGAAGCACAATTCCTATTGAGCGATGAGTAGAATCTTTTGCAGACGACTTAAATACGCGACGGGGTATTGTAAGTGGCAGAGTGGCCTTGCTGCCA
CGATCCACTGAGATTCAGCCCTTGTCGCTTCGATTCGTCCCTCCCCCCAACCCTTA