Detailed information on CNT30463744


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONTAET000283, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30132535Saccharum spontaneumLolium perenne45.5799.1498.41379reverse complement

Expression of CNT30463744

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MLPSLSAPSGCGSSALEYLWRCLVMSSSRVAPPRTPRLCFWLRMRLMPKAGGRWPPVPTNRVRLETTTASPADASCGGRRRLVGEDVLPG*

>peptide 2 (54 aa)
MMRRRHEGRAIRQVIMNHRISEQSRVSLLSNKCAPPGSRGLLHVLALELLRLSE*

>peptide 3 (68 aa)
AGVRLTPSASVLSFVRAPFACCIDECLRAATCPTGSCVRLHVAFVERTLWVWLVGSRVLVALPRDVVL*

>peptide 4 (31 aa)
MKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

>peptide 5 (35 aa)
MPTRDRRMLLIGLRRHLMRNQSFGFRGEYGRKAET*

>peptide 6 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 7 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 8 (44 aa)
MRPSRKSGFVARISSRITTVIRVARTIKQTITDLMSHSQFHSSN*

>peptide 9 (50 aa)
MMLSHANVSRAMACFEHSNFFKVTAPEARPGQLRPGAHRRQKGRVGRFSP*

>peptide 10 (49 aa)
MPRAEVGAGSSARTCYLVDPASSHMLVSKIKPCMCKYELIRTVKLRMAH*

Sequence

>CNT30463744
GCCGGTGTGCGGCTGACTCCTAGCGCCAGCGTCCTGTCATTCGTGCGGGCACCTTTTGCCTGCTGCATTGACGAGTGCTTGCGTGCTGCTACCTGTCCCA
CGGGAAGTTGCGTTCGGTTACATGTTGCCTTCGTTGAGCGCACCCTCTGGGTGTGGCTCGTCGGCTCTAGAGTACTTGTGGCGTTGCCTCGTGATGTCGT
CCTCTAGGGTGGCACCGCCAAGGACACCTCGCTTGTGCTTTTGGTTGCGGATGCGGCTGATGCCGAAGGCCGGAGGGCGTTGGCCTCCCGTGCCTACAAA
CCGAGTCCGTTTGGAAACAACGACAGCTAGCCCGGCCGATGCCTCGTGCGGAGGTCGGCGCCGGCTCGTCGGCGAGGACGTGCTACCTGGTTGATCCTGC
CAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGCAAGTATGAACTAATTCGAACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGT
TTGTTTGATGGTACGTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCCGGGAGGGGCGCATTTATTAGATAAAA
GGCTGACGCGGGCTCTGCTCGCTGATCCGATGATTCATGATAACTTGACGGATCGCACGGCCCTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTAT
CAACTTTCGATGGTAGGATAGGGGCCTACCATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACAT
CCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCGCGTTAGTGTCTGGTAATTGGAAT
GAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTG
CAGTTAAAAAGCTCGTAGTTGGACCTTGGGCCGGGTCGGCCGGTCCGCCTCACGGCGAGAACCGACCTACTCGACCCTTCTGCCGGCGATGCGCTCCTGG
CCTTAATTGGCCGGGTCGTGCCTCCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCATCGCTCTGGATACATTAGCATGGGATAACATC
ATAGGATTCCGGTCCTATTGTGTTGGCCTTCGGGATCGGAGTAATGATTAATAGGGACAGTCGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTG
GATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTA
GTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTATAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTGGGTTCCGGGGGGAG
TATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGCGTGGAGCCTGTGGCTTAATTTGACTCAACACGGGGAAACTTACCAGGT
CCAGACATAGCAAGGATTGACAGACTGAGAGCTCTTTCTTGATTCTATGGATGGCTCCGCATAGCTAGTTAGCAGGCTGAGGTCTCGTTCGTTAACGGAA
TTAACCAGACAAATCGCTCCACCAACTAAGAACGGCCATGCACCACCACCCATAGAATCAAGAAAGAGCTCTCAGTCTGTCAATCCTTGCTATGTCTGGA
CCTGGTAAGTTTCCCCGTGTTGAGTCAAATTAAGCCGCAGGCTCCACGCCTGGTGGTGCCCTTCCGTCAATTCCTTTAAGTTTCAGCCTTGCGACCATAC
TCCCCCGGAACCCAAAGACTTTGATTTCTCATAAGGTGCCGGCGGAGTCCTATAAGCAACATCCGCCGATCCCTGGTCGGCATCGTTTATGGTTGAGACT
AGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTCGCAGTTGTTCGTCTTTCATAAATCC
AAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGCCAACACAATAGGACCGGAATCCTAT
GATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACAGCGCCGGAGGCACGACCCGGCCAATTAAGG
CCAGGAGCGCATCGCCGGCAGAAGGGTCGAGTAGGTCGGTTCTCGCCGTGAGGCGGACCGGCCGACCCGGCCCAAGGTCCAACTACGAGCTTTTTAACTG
CAACAACTTAAATATACGCTATTGGAGCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTC
ATTCCAATTACCAGACACTAACGCGCCCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGG
ATGTGGTAGCCGTTTCTCAGGCTCCCTCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTG
ATAGGGCAGAAATTTGAATGATGCGTCGCCGGCACGAGGGCCGTGCGATCCGTCAAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCGCGTCAGCCT
TTTATCTAATAAATGCGCCCCTCCCGGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAA
CTATAACTGATTTAATGAGCCATTCGCAGTTTCACAGTTCGAATTAGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGG
CAGGATCAACCAGGTAGCACGTCCTC