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Detailed information on CNT30566050


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30617856Actinidia chinensisSesamum indicum98.3293.0996.331172reverse complement

Expression of CNT30566050

Peptides detected in this lncRNA

>peptide 1 (33 aa)
MECYLVNPASSHMLVSKIKPCMCKYELIQTVKL*

>peptide 2 (36 aa)
MITRRIARPSCRRRIIQISALSTFDGRIVAYYGVNG*

>peptide 3 (43 aa)
CGANVAKECYLVNPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 4 (44 aa)
MHLLDKRSTRALPVALMIHDNSTDRTAFVPATHHSNFCPINFRW*

>peptide 5 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

Sequence

>CNT30566050
ATGCGGTGCCAACGTCGCAAAGGAATGCTACCTAGTTAATCCTGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTA
ATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTATAGTTTGTTTGATGGAATGCTACTTGGTTAATCCTGCCAGTAGTCATATGCTTGTCTCA
AAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGTGAATGGCTCAATAAATCAGTTATAGTTTGTTTGATGGTATTTGCTACT
CGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAAAAGGTCGACGCGGGCTTTGCCCGT
TGCTCTGATGATTCATGATAACTCGACGGATCGCACGGCCTTCGTGCCGGCGACGCATCATTCAAATTTCTGCCCTATCAACTTTCGATGGTAGGATAGT
GGCCTACTATGGTGTTAACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCACATCCAAGGAAGGCAGCAGGCGCGC
AAATTACCCAATCCTGACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCATTGAGTCTGGTAATTGGAATGAGTACAATCTAAATCCCTTAAC
GAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGGA
TTTTGGGTTGGGCCGACCGGTCCGCCTTCAGGTGTGCACCGGTCGTCTCGTCCCTTCTGCCGGCGATGCGCTCCTAGCCTTAACTGGCCGGGTCGTGCCT
CCGGCGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCTACGCTCTGGATACATTAGCATGGGATAACATCATAGGATTTCGATCCTATTCTGT
TGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCTTGGATTTATGAAAGACGAACAACT
GCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCCTAGTCTCAACCATAAA