Detailed information on CNT30433944


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONCQUT004405, E-value = 0.0

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30638987Papaver somniferumCapsicum annuum77.3695.6496.541821forward

Expression of CNT30433944

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MASLRNATWLILPVVICLSQRLSHACVSMN*

>peptide 2 (33 aa)
MPTRDRRMLLLGLRRHLMRNQSFWVPGGVWSQG*

>peptide 3 (40 aa)
MDASAPLLFLLPRWGKCSGRCREIQSSNDSRQRISRLSHR*

>peptide 4 (44 aa)
MHLLDKRSTRALPVAQMIHDNLTDRTAFVLATHHSNFCPINFRW*

>peptide 5 (49 aa)
MLARLFSFSCLGGENAAVGVAKSNLRTTLGNGYLGSRIDEERSEMRYLV*

>peptide 6 (47 aa)
MGGGAWPFLVGGAICLVNSVNERDLSLLTSYAEDSLRGQLLRGTMAV*

>peptide 7 (62 aa)
NRLLSSPSCCTVKSRRRSGPEDGVIEECYLVDPASSHMLVSKIKPCMCKYELIQTVKLRMAH*

>peptide 8 (56 aa)
MKNVAKCDTWCELQNPVNHRVFERKLRPKPSGRGHACLGVTHRVSPSNSCPWRLLAT

>peptide 9 (52 aa)
MINRDSRGHSYFIVRGEILGFMKDEQLRKHLPRMFSLIKNESWGLEDDQIPS*

Sequence

>CNT30433944
AAAATCGACTGCTATCTTCTCCCTCCTGTTGTACGGTGAAATCCCGACGACGGTCTGGGCCAGAAGATGGCGTCATTGAGGAATGCTACCTGGTTGATCC
TGCCAGTAGTCATATGCTTGTCTCAAAGATTAAGCCATGCATGTGTAAGTATGAACTAATTCAGACTGTGAAACTGCGAATGGCTCATTAAATCAGTTAT
ATTTGTTTGATGGTACTTGCTACTCGGATAACCGTAGTAATTCTAGAGCTAATACGTGCAACAAACCCCGACTTCTGGAAGGGATGCATTTATTAGATAA
AAGGTCGACGCGGGCTTTGCCCGTTGCTCAGATGATTCATGATAACTTGACGGATCGCACGGCCTTTGTGCTGGCGACGCATCATTCAAATTTCTGCCCT
ATCAACTTTCGATGGTAGGATAGTGGCCTACTATGGTGGTGACGGGTGACGGAGAATTAGGGTTCGATTCCGGAGAGGGAGCCTGAGAAACGGCTACCAC
ATCCAAGGAAGGCAGCAGGCGCGCAAATTACCCAATCCTAACACGGGGAGGTAGTGACAATAAATAACAATACCGGGCTCTTCGAGTCTGGTAATTGGAA
TGAGTACAATCTAAATCCCTTAACGAGGATCCATTGGAGGGCAAGTCTGGTGCCAGCAGCCGCGGTAATTCCAGCTCCAATAGCGTATATTTAAGTTGTT
GCAGTTAAAAAGCTCGTAGTTGGACTTTGGGTTGGGTCGTCCGGTCCGCCCTTTGGGTGTGCACCGGTCGTCTCTCCCTTCTACCGGCGATGCGTTCCTA
GCCTTAATTGGCCGGGTCGTGCCTCCGGTGCTGTTACTTTGAAGAAATTAGAGTGCTCAAAGCAAGCCCAAGCTCTGGATACATTAGCATGGGATAACAT
CATAGGATTTCTGTCCTATTGCGTTGGCCTTCGGGATCGGAGTAATGATTAACAGGGACAGTCGGGGGCATTCGTATTTCATAGTCAGAGGTGAAATTCT
TGGATTTATGAAAGACGAACAACTGCGAAAGCATTTGCCAAGGATGTTTTCATTAATCAAGAACGAAAGTTGGGGGCTCGAAGACGATCAGATACCGTCC
TAGTCTCAACCATAAACGATGCCGACCAGGGATCGGCGGATGTTGCTTTTAGGACTCCGCCGGCACCTTATGAGAAATCAAAGTTTTTGGGTTCCGGGGG
GAGTATGGTCGCAAGGCTGAAACTTAAAGGAATTGACGGAAGGGCACCACCAGGAGTGGAGCCTGCGGCTTAATTTGACTCAACACGGGGAAACTTACCA
GGTCCAGACATAGTAAGGATTGACAGACTGGGAGCTCTTTCTTGATTCTATGGGTGGTGGTGCATGGCCGTTCTTAGTTGGTGGAGCGATTTGTCTGGTT
AATTCCGTTAACGAACGAGACCTCAGCCTGCTAACTAGCTATGCGGAGGATTCCCTCCGCGGCCAGCTTCTTAGAGGGACTATGGCCGTTTAGGCCACGG
AAGTTTGAGGCAATAACAGGTCTGTGATGCCCTTAGATGTTCTGGGCCGCACGCGCGCTACACTGATGCATTCAACGAGTATATAGCCTTGGCCGACAGG
CCCGTGTAATCTTTTAAAGTGCATCGTGATCGGGCTAGATCATTGCAATTGTTGGTCTTAAACGAGGAATTCCTAGTAAGCGCGAGTCATCAGCTCGCGT
TGACTACGTCCCTGCCCTTTGTACACACCGCCCGTCACTCCTACCGATTGAATGGTCCGGTGAAGTGTTCGGATCGCGGCGACGCTGGCGGTTCGCCGCC
GGTGACGTCGCGAGAAGTCCACTGAACCTTATCATTTAGAGGAAGGAGAAGTCGTAAGAAGGTTTCCGTAGGTGAACCTGCGGAAGGATCATTGTCGAAA
CCTGCCCAGCAGAACGACCCGCGAACACGTGAATCCAAGTCCAGTGGTGGTGCAAGTGGGGAGAGATCCCCCTTGCTCCACCGCTCGGTCGGGGAGTTGG
CTAACACCCTCTCTTTGTGCCGGAAAACGAACCCAAGGCGCGGTGAGCGCCAAGGAAAAAACAAATGGATGCTAGCGCGCCTCTTCTCTTTCTCCTGCCT
CGGTGGGGAAAATGCAGCGGTAGGTGTCGCGAAATCCAATCTTCGAACGACTCTCGGCAACGGATATCTCGGCTCTCGCATCGATGAAGAACGTAGCGAA
ATGCGATACTTGGTGTGAATTGCAGAATCCCGTGAACCATCGAGTTTTTGAACGCAAGTTGCGCCCCAAGCCTTCGGGCCGAGGGCACGCTTGCCTGGGC
GTCACGCACCGAGTCTCCCCCTCCAACTCATGTCCTTGGCGCCTTCTGGCGACA