« Back to Cajanus cajan search


Detailed information on CNT30619906


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 1e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691498Cajanus cajanOryza sativa28.6431.590.4863forward
CNT30523938Cajanus cajanSetaria italica41.3617.689.0191forward
CNT30549654Cajanus cajanIpomoea triloba6036.6788.64132forward
CNT3042438Cajanus cajanPrunus dulcis38.1810.2189.2984forward
CNT30178846Cajanus cajanSecale cereale307.4186.3666forward
CNT30293493Cajanus cajanTriticum aestivum44.0915.1393.8197forward
CNT30223457Cajanus cajanHordeum vulgare23.1817.1196.0851forward
CNT30393023Cajanus cajanTriticum turgidum35.4517.8597.4478forward
CNT30592382Cajanus cajanMusa acuminata44.5516.4790.8298forward
CNT30146554Cajanus cajanMedicago truncatula81.3648.2582.12179forward
CNT30442853Cajanus cajanAegilops tauschii21.827.4193.7548forward
CNT30247019Cajanus cajanAvena sativa57.2710.2593.65126forward
CNT30660459Cajanus cajanTriticum dicoccoides44.0914.9993.8197forward
CNT30136463Cajanus cajanLolium perenne51.8215.5592.11114forward
CNT3066802Cajanus cajanLeersia perrieri2523.2190.9155forward
CNT30680513Cajanus cajanTriticum urartu31.3626.7488.4169forward
CNT30721484Cajanus cajanTriticum spelta52.7315.8793.1116forward
CNT30352266Cajanus cajanEragrostis tef34.0914.1589.3375forward
CNT30361046Cajanus cajanSorghum bicolor4515.8993.9499forward
CNT30595700Cajanus cajanOryza meridionalis28.6429.4488.8963forward
CNT30369235Cajanus cajanOryza glumipatula42.738.3387.2394forward
CNT30154895Cajanus cajanPrunus persica52.2715.2385.22115forward
CNT30706772Cajanus cajanPrunus avium60.9138.1885.82134forward
CNT30331344Cajanus cajanDioscorea rotundata51.8216.7986.84114forward
CNT30102065Cajanus cajanOryza rufipogon3011.1189.3966forward
CNT30576737Cajanus cajanOryza barthii3015.1789.3966forward
CNT30116026Cajanus cajanOryza nivara28.6411.9890.4863forward
CNT3039310Cajanus cajanMarchantia polymorpha20.455.191.1145forward

Expression of CNT30619906

Peptides detected in this lncRNA

>peptide 1 (72 aa)
EAVTKARSKELGDDVRDAAKEGDVAAHEGAEGHGGVHVAAGDVGAHGHGHEEGECMGDGGGDQTSGGGGAVVG

>peptide 2 (59 aa)
MTYAMPRRKVMLPPTKAPKVTAGFTWPPEMLAPTDTATKRANAWAMAAEIRPAGVAAPLS

Sequence

>CNT30619906
CGAAGCGGTGACGAAGGCCAGGAGCAAGGAGCTGGGCGATGACGTACGCGATGCCGCGAAGGAAGGTGATGTTGCCGCCCACGAAGGCGCCGAAGGTCAC
GGCGGGGTTCACGTGGCCGCCGGAGATGTTGGCGCCCACGGACACGGCCACGAAGAGGGCGAATGCATGGGCGATGGCGGCGGAGATCAGACCAGCGGGG
GTGGCGGCGCCGTTGTCGGT