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Detailed information on CNT30680513


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691498Triticum urartuOryza sativa73.649586.32190forward
CNT30523938Triticum urartuSetaria italica33.3316.6387.2186forward
CNT30177409Triticum urartuSecale cereale20.544.5888.6853forward
CNT30225308Triticum urartuHordeum vulgare56.5951.0591.1146forward
CNT30396950Triticum urartuTriticum turgidum73.2680.7787.3189forward
CNT30592160Triticum urartuMusa acuminata24.0315.3588.7162forward
CNT30553963Triticum urartuOryza glaberrima24.038.8290.3262forward
CNT30442853Triticum urartuAegilops tauschii24.039.5788.7162forward
CNT30142178Triticum urartuLolium perenne24.039.5888.7162forward
CNT30722694Triticum urartuTriticum spelta24.039.6688.7162forward
CNT30352266Triticum urartuEragrostis tef20.541088.6853forward
CNT30365926Triticum urartuSorghum bicolor40.3115.5587.5104forward
CNT30619906Triticum urartuCajanus cajan26.7431.3688.4169forward
CNT30595700Triticum urartuOryza meridionalis73.2688.3286.24189forward
CNT30370544Triticum urartuOryza glumipatula24.037.3390.3262forward
CNT30102065Triticum urartuOryza rufipogon24.0310.4488.7162forward
CNT30576737Triticum urartuOryza barthii24.0314.2590.3262forward
CNT30116026Triticum urartuOryza nivara82.9540.6885.51214forward
CNT30113801Triticum urartuFicus carica27.5217.1985.9271forward

Expression of CNT30680513

Peptides detected in this lncRNA

>peptide 1 (56 aa)
MVTWPPEMLAAMATPTKRAKAWAMAIATRPAGSSAPPCVSCPAQEEPLWLAMEQART

>peptide 2 (84 aa)
LAVGDKLQEEACHGGAEQLGDPVEEPSEDGDVAAGDVGRHGHTDEEGEGMGDGDRHKASGVQRATLRQLPCTRRTSLVSHGASQN

Sequence

>CNT30680513
CCTGGCCGTGGGTGACAAACTGCAGGAGGAGGCATGCCACGGTGGCGCCGAGCAGCTGGGCGACCCAGTAGAAGAGCCCAGTGAGGATGGTGACGTGGCC
GCCGGAGATGTTGGCCGCCATGGCCACACCGACGAAGAGGGCGAAGGCATGGGCGATGGCGATCGCCACAAGGCCAGCGGGGTCCAGCGCGCCACCCTGC
GTCAGTTGCCCTGCACAAGAAGAACCTCTTTGGTTAGCCATGGAGCAAGCCAGAACCG