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Detailed information on CNT30660459


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690186Triticum dicoccoidesOryza sativa18.0822.8593.16117forward
CNT30549654Triticum dicoccoidesIpomoea triloba13.7624.7291.0189forward
CNT30628532Triticum dicoccoidesVigna unguiculata12.6720.2590.2482forward
CNT30291489Triticum dicoccoidesTriticum aestivum39.5760.09100256forward
CNT30223457Triticum dicoccoidesHordeum vulgare14.8432.2185.4296forward
CNT30388298Triticum dicoccoidesTriticum turgidum50.2356.23100325forward
CNT30586176Triticum dicoccoidesMusa acuminata26.7428.3680.35173forward
CNT30552153Triticum dicoccoidesOryza glaberrima26.7427.6893.06173forward
CNT30242094Triticum dicoccoidesAvena sativa17.9331.5282.76116forward
CNT3066802Triticum dicoccoidesLeersia perrieri8.523.2190.9155forward
CNT30619906Triticum dicoccoidesCajanus cajan13.7640.4594.3889forward
CNT30369415Triticum dicoccoidesOryza glumipatula26.7418.6893.06173forward
CNT30706772Triticum dicoccoidesPrunus avium12.5223.0887.6581forward
CNT30113801Triticum dicoccoidesFicus carica13.7621.5589.8989forward

Expression of CNT30660459

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MLPPTKAPNVTAGFTCPPEMLAPTETATKSANACASAAAISPASVVAPPSVSLPAT

>peptide 2 (79 aa)
MEEAGHDGAEQLRHPVHHGLEQADVAAHEGAECDGRVHVPAGDVGAHGDGHEERERVRQRRRDKPRQRRRAAVSQLACHA

>peptide 3 (83 aa)
MDEMRLRFSVVGGGELLVGALADEADVVDEGGDGGAGEGAEPVDPVVLPDAADDSGAEGDGGVHGGGRPRRSRAAAPPSTPRP*

Sequence

>CNT30660459
GGAATAGAAGCATTCATAATTGAGGACGTACATACATACACCAAGATAAGAGAAGGATGAGATTATTCCTGACTGACTGACTCGCACACACTGTTTACCC
TGAATTTCTCAAGGACAAGATAGCGCAATGAAACTAAACTGGCTTACTGATGATGACGCGACGACGTACACTTGCTGGAATTTTTGAAGCGATTTCAATC
TCTCATGGCGATGACGGATGGACGAGATGAGATTGAGGTTTTCAGTAGTCGGCGGTGGGGAGCTGCTCGTGGGGGCGCTGGCCGATGAAGCAGATGTCGT
AGACGAGGGCGGCGATGGCGGCGCCGGCGAAGGGGCCGAGCCAGTAGACCCAGTGGTTCTCCCAGACGCCGCTGACGACAGCGGGGCCGAAGGAGACGGC
GGGGTTCATGGAGGAGGCAGGCCACGACGGAGCCGAGCAGCTGCGCCACCCAGTACACCACGGCCTTGAGCAGGCTGATGTTGCCGCCCACGAAGGCGCC
GAATGTGACGGCCGGGTTCACGTGCCCGCCGGAGATGTTGGCGCCCACGGAGACGGCCACGAAGAGCGCGAACGCGTGCGCCAGCGCCGCCGCGATAAGC
CCCGCCAGCGTCGTCGCGCCGCCGTCAGTCAGCTTGCCTGCCACGCC