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Detailed information on CNT30595700


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691498Oryza meridionalisOryza sativa92.9999.598.49199forward
CNT30519799Oryza meridionalisSetaria italica46.7316.6488100forward
CNT30376051Oryza meridionalisArabidopsis thaliana20.565.4190.9144forward
CNT30712600Oryza meridionalisGlycine max29.448.4590.4863forward
CNT30225308Oryza meridionalisHordeum vulgare90.6567.8387.11194forward
CNT30396950Oryza meridionalisTriticum turgidum91.1283.3385.64195forward
CNT30442853Oryza meridionalisAegilops tauschii28.59.4190.1661forward
CNT30142178Oryza meridionalisLolium perenne28.59.4390.1661forward
CNT30680513Oryza meridionalisTriticum urartu88.3273.2686.24189forward
CNT30722694Oryza meridionalisTriticum spelta28.59.590.1661forward
CNT30352266Oryza meridionalisEragrostis tef28.0411.3291.6760forward
CNT30619906Oryza meridionalisCajanus cajan29.4428.6488.8963forward
CNT30706772Oryza meridionalisPrunus avium25.715.6787.2755forward
CNT30579360Oryza meridionalisEchinochloa crusgalli23.368.249250forward
CNT30116026Oryza meridionalisOryza nivara10040.6897.66214forward
CNT30113801Oryza meridionalisFicus carica40.6521.0785.0687forward

Expression of CNT30595700

Peptides detected in this lncRNA

>peptide 1 (70 aa)
RADLAVGYKLEEEAGDGGAEQLGDPVEESGEDGDVAAGDVGGDGNANEQGECMGDRDRHKAGRVEGAAISQ

>peptide 2 (39 aa)
MVMWPPEMLAATETPTNRASAWAIAIATRPAGSRAPPLVN

Sequence

>CNT30595700
CGTGCTGACCTTGCCGTGGGTTACAAACTTGAGGAGGAGGCAGGCGATGGAGGCGCCGAGCAGCTGGGCGATCCAGTAGAAGAGTCCGGTGAGGATGGTG
ATGTGGCCGCCGGAGATGTTGGCGGCGACGGAAACGCCAACGAACAGGGCGAGTGCATGGGCGATCGCGATCGCCACAAGGCCGGCCGGGTCGAGGGCGC
CGCCATTAGTCAAT