« Back to Prunus persica search


Detailed information on CNT30154895


BLAST search results

BLAST vs Swiss-Prot:
sp|P25818|TIP11_ARATH, E-value = 3e-41

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549654Prunus persicaIpomoea triloba15.8933.3389.17120forward
CNT30628532Prunus persicaVigna unguiculata15.7629.3886.55119forward
CNT30708714Prunus persicaGlycine max18.5431.3987.86140forward
CNT3042438Prunus persicaPrunus dulcis88.4881.1796.86668forward
CNT30223457Prunus persicaHordeum vulgare8.3421.1487.363forward
CNT30393023Prunus persicaTriticum turgidum13.7723.887.5104forward
CNT30568703Prunus persicaActinidia chinensis26.2311.9581.31198forward
CNT30552975Prunus persicaOryza glaberrima16.2921.2186.99123forward
CNT30146554Prunus persicaMedicago truncatula11.7923.9985.3989forward
CNT30135940Prunus persicaLolium perenne14.1720.1185.05107forward
CNT30722694Prunus persicaTriticum spelta19.4722.980.27147forward
CNT30619906Prunus persicaCajanus cajan15.2352.2785.22115forward
CNT30706773Prunus persicaPrunus avium23.5828.7197.19178forward
CNT3057335Prunus persicaAmborella trichopoda18.9441.0980.42143forward
CNT30576737Prunus persicaOryza barthii14.1724.682.24107forward
CNT30579749Prunus persicaEchinochloa crusgalli18.1522.3584.67137forward
CNT30176366Prunus persicaVigna angularis13.3821.0988.12101forward
CNT30113801Prunus persicaFicus carica21.3238.9890.06161forward

Expression of CNT30154895

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MTDFEPAVAGCRFVGNLKVERDWWTACEIAK*

>peptide 2 (98 aa)
MPRRREILPPTKAPKVTAGLTCPPEMFALTETATKRPNPWARAAATRPAGVVAAPWVSLAKTKISVEMNSARPALKASGWYASSGRPTAMFRIGIVGG*

Sequence

>CNT30154895
CTGCGAAGCACATAATCAAGACCCGTTAGTCACACTTTTAATATAAAATGATATATTAACGAACTTAACGAGAAACTTATAGTTCAAAAAGGGCCAGAAA
GTGATAAAATTACCTGGTAGTTGGTTGCGAACCTGAGGAGACCGCACGCGACGGCGGACCCGAGGAGCTGGGCGATCCAATAGAGGATGCCGCGGAGGAG
GGAGATATTGCCGCCGACGAAGGCGCCGAAAGTGACCGCGGGGTTGACGTGTCCGCCGGAGATGTTCGCACTGACGGAGACGGCGACGAAGAGGCCGAAT
CCGTGGGCTAGAGCGGCGGCGACGAGGCCTGCTGGCGTGGTCGCGGCCCCGTGGGTGAGCTTGGCGAAGACGAAGATCAGCGTGGAAATGAACTCGGCGA
GACCCGCCCTCAAGGCGTCCGGGTGGTACGCCTCCTCGGGTCGGCCAACGGCAATGTTCCGGATCGGCATCGTCGGAGGATGATTAAGATCGGACGGTGG
AGATTCGCTGCAGAATTAAGCTGCGTACGGTCGCTCACAAACTACTTCACTCTTGGCTCAGTATAGTGATAGTGTTTGGTAGTGATAGTGTTTGGTGTTA
TATACTGAAGTTGATGACTGATTTTGAACCGGCTGTAGCCGGTTGCCGGTTCGTAGGGAATTTGAAAGTAGAACGTGATTGGTGGACAGCCTGTGAAATA
GCGAAATAATTTTTATTTTTGGGTTGAGGCGTCGACGTATCTCATAGTAATCTCT