CANTATAdb - search

Detailed information on CNT3082002

BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SY97|LHCA3_ARATH, E-value = 2e-100

BLAST vs NONCODE: nothing found

Expression of CNT3082002

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MASIASLPFLTSLSFNSFIDFSSFPNPRGLKKGPPG*

>peptide 2 (39 aa)
MFTQGVTTQRSWWYQRERNKIVGYMRMGYQHKTPWDDMI*

>peptide 3 (50 aa)
NPRSCSLWPLTLSFLTKDEYVYTGCYNTKKLVVPKRKKQDCRIHENGIPT*

>peptide 4 (34 aa)
MAIDIVISYKRRICLHRVLQHKEAGGTKEKETRL*

Sequence

>CNT3082002
TAATCCTAGAAGCTGTTCTTTATGGCCATTGACATTGTCATTTCTTACAAAAGACGAATATGTTTACACAGGGTGTTACAACACAAAGAAGCTGGTGGTA
CCAAAGAGAAAGAAACAAGATTGTAGGATACATGAGAATGGGATACCAACATAAAACACCATGGGATGATATGATATGATCATCTCAGTGGAACTTGAGG
CTGGTCAAGACATTGTTGTTGACGGGATCCGCCAAATGATCAAGTAGGTTCTGGTAAGGTCCCACACCGGTCACTAGTCCCTGCACAAAATAGCCTAGGA
TGGCGAGCATCGCCAGTCTACCGTTCTTGACCTCCTTGAGTTTCAACTCCTTCATTGACTTCTCGTCTTTTCCAAACCCAAGAGGGTTGAAGAAAGGTCC
GCCGGGGTAAGCCGGGTTACCTGAACCGGCGAAACCTTTCTCTAGACCCAAGAAGTATTGTTTACCCATAGATCCTGGGTTGTACCAGTCCTGCAACCTC
CTGTGCTCGGCAAATCCCATCAAAGCCATCTCGAGAACAAAGAGTGTGTAAGGGTCTGCCCAGTAGCTGTATGTCCCTGCAGGTGCAATAGCTCCAGCTG
CACCCAACATAGCAAACCGCCCGTTGATGATCTCTCCGTAGGCTAACCATCTCGGCTCGATGAACCCTCCAGTACCCTCTGGGTCTGAAAGACCAAGCGG
GTCGAATCCAAAGTCGCCAGGTAAGCTGC