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Detailed information on CNT30307041


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSTUT001430, E-value = 8e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30535924Triticum aestivumEucalyptus grandis31.5357.6883.43169forward
CNT30516792Triticum aestivumJuglans regia49.6329.8983.46266forward
CNT30376525Triticum aestivumArabidopsis thaliana61.0142.7581.04327forward
CNT30727661Triticum aestivumCorchorus capsularis45.7139.1480.82245forward
CNT30378908Triticum aestivumManihot esculenta47.9527.2280.54257forward
CNT30628927Triticum aestivumVigna unguiculata52.245080.36280forward
CNT30490956Triticum aestivumOlea europaea38.8149.5280.77208forward
CNT30506120Triticum aestivumNicotiana attenuata64.7459.3279.25347forward
CNT3091613Triticum aestivumSolanum tuberosum56.3439.9580.13302forward
CNT30399358Triticum aestivumTriticum turgidum96.8389.33100519forward
CNT30559889Triticum aestivumActinidia chinensis23.8831.3785.94128forward
CNT3088022Triticum aestivumVigna radiata52.2464.8179.64280forward
CNT30508904Triticum aestivumSolanum lycopersicum41.7936.2582.14224forward
CNT3062262Triticum aestivumArabidopsis lyrata50.1949.0981.04269forward
CNT3076593Triticum aestivumBrassica juncea50.1949.2781.78269forward
CNT30263540Triticum aestivumBrassica rapa48.6940.4783.14261forward
CNT30605857Triticum aestivumGossypium raimondii50.7533.5481.99272forward
CNT30350935Triticum aestivumEragrostis tef76.1254.8484.56408forward
CNT30476941Triticum aestivumArabidopsis halleri50.1933.5881.04269forward
CNT30620243Triticum aestivumCajanus cajan39.5563.8682.08212forward
CNT30641843Triticum aestivumCannabis sativa51.8757.880.58278forward
CNT3027877Triticum aestivumTheobroma cacao28.9239.2485.16155forward
CNT3051702Triticum aestivumAmborella trichopoda43.4738.0781.55233forward
CNT30121168Triticum aestivumCitrus clementina46.2723.3581.45248forward
CNT30330867Triticum aestivumDioscorea rotundata36.1926.8384.02194forward
CNT30176441Triticum aestivumVigna angularis55.9749.5981300forward

Expression of CNT30307041

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MMATLGCKMATSGCMQEMLGCMLARSDYKPVMLDYSSAMWGYSLVMLGCSSEMWGCS*

Sequence

>CNT30307041
CTCGGTGAAGTGGGGCTGTAGTTCGGTGAAGTAGGGCTGTAGCTCGGTGACGTCGGGCTGTAACCAGGCGATGTAGGGCTGTATGCAGGCGATGTAGGGC
TGTATGAGGGCGAGGTAGGGCTGTATGAGGGGGATGTCGGGCTGTATGAGGGTGACGTGGGGCTGTATGAGGGTGATGTCGGGCTGTACGAGGGAGAAGT
AGGGCTGTATGATGGCGACGTTGGGCTGTAAGATGGCGACGTCGGGCTGTATGCAGGAGATGTTGGGCTGTATGCTGGCGAGGTCGGACTATAAACCGGT
GATGTTGGACTATAGCTCGGCGATGTGGGGCTATAGCTTGGTGATGTTGGGCTGTAGCTCGGAGATGTGGGGCTGTAGCTAGGAGATGTGGGGCTGTAGC
TGGGCGATGCAGGGCTGTATGATGGAGAAGTGGGACTGTAACCATGTCCTGGCCCTGGGCTGAACACCGGAGAAGATGGACTGTAACCACCTCCAGAGGA
TGGGCTGTAGTTTGACGGGACGGGTGAGAATGCCAT