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Detailed information on CNT30490956


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONSLYT000794, E-value = 2e-30

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30523536Olea europaeaSetaria italica81.1960.3578.89341forward
CNT30536082Olea europaeaEucalyptus grandis73.3352.0380.19308forward
CNT30315764Olea europaeaCorylus avellana7044.9583.33294forward
CNT30700558Olea europaeaQuercus lobata51.980.7482.57218forward
CNT30500604Olea europaeaCoffea canephora84.7657.8981.74356forward
CNT30616515Olea europaeaSesamum indicum71.1944.3685.62299forward
CNT30727661Olea europaeaCorchorus capsularis63.5742.6582.02267forward
CNT30195835Olea europaeaPisum sativum36.961.0283.87155forward
CNT30506121Olea europaeaNicotiana attenuata42.8643.4883.33180forward
CNT3042412Olea europaeaPrunus dulcis74.7642.3881.21314forward
CNT3091361Olea europaeaSolanum tuberosum84.0548.0380.74353forward
CNT30307041Olea europaeaTriticum aestivum49.5238.8180.77208forward
CNT30400271Olea europaeaTriticum turgidum51.944.0481.19218forward
CNT30591924Olea europaeaMusa acuminata74.7658.9181.21314forward
CNT30508941Olea europaeaSolanum lycopersicum92.6297.9880.46389forward
CNT30554580Olea europaeaOryza glaberrima54.7633.8282.61230forward
CNT30145737Olea europaeaMedicago truncatula69.0547.0881.38290forward
CNT30256659Olea europaeaAvena sativa55.4832.5981.97233forward
CNT30311656Olea europaeaCamelina sativa58.5744.3281.71246forward
CNT30263459Olea europaeaBrassica rapa69.2953.7982.13291forward
CNT3016764Olea europaeaZea mays80.4860.1479.59338forward
CNT30608057Olea europaeaGossypium raimondii71.1950.4280.27299forward
CNT3067979Olea europaeaLeersia perrieri41.948.8982.39176forward
CNT30205103Olea europaeaHelianthus annuus64.7638.4283.09272forward
CNT30341750Olea europaeaEragrostis tef62.6248.5280.99263forward
CNT30366570Olea europaeaSorghum bicolor80.4855.2380.18338forward
CNT30596736Olea europaeaOryza meridionalis54.7630.4680.87230forward
CNT30370935Olea europaeaOryza glumipatula62.6227.1780.23263forward
CNT30154935Olea europaeaPrunus persica81.4380.4781.58342forward
CNT30573855Olea europaeaVitis vinifera56.939.783.68239forward
CNT30642143Olea europaeaCannabis sativa49.7650.8581.82209forward
CNT30121063Olea europaeaCitrus clementina53.3346.7681.25224forward
CNT3035176Olea europaeaCucumis melo56.4343.0982.7237forward
CNT30103220Olea europaeaOryza rufipogon56.1925.481.78236forward
CNT30577473Olea europaeaOryza barthii65.4850.4678.91275forward
CNT30584594Olea europaeaEchinochloa crusgalli54.5237.0681.22229forward

Expression of CNT30490956

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MQVRWGCMMEKLDCMTERWGCTMEKSDYTMEKSGCMLGKLGCTQEK*

Sequence

>CNT30490956
GAGGGACTGTACGGACTAGAAGGTGTGATCTTTGGACTAGTAGGCGAGTATGCTAGGGAAGGGCTGTATCTGGCTGAGGGATTGTAACTCGGTGATGTAG
GGCTGTAACTTGGAGAGGTAGGGCTGTAACTGGGGGAGGTGGGGCTATATCCAGGAGAGGTTGGGCTATATGCAGGTGAGGTGGGGCTGTATGATGGAGA
AGTTGGACTGTATGACGGAGAGGTGGGGCTGTACGATGGAGAAGTCGGACTATACGATGGAGAAGTCGGGCTGTATGCTGGGGAAGTTGGGCTGTACGCA
GGAGAAGTAGGACTGTAACTTGGAGATGTAGGGCTGTAACTTGGCGACGTTGGGCTGTAACTAGGTGACGTTGGGCTGTAACTGGGAGAAGTTGGTGAAT
ACGATGGACTTGTAGGAGAA