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Detailed information on CNT30559889


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30549166Actinidia chinensisIpomoea triloba31.3719.0585.94128forward
CNT3021333Actinidia chinensisCitrullus lanatus79.955.0783.13326forward
CNT30307041Actinidia chinensisTriticum aestivum31.3723.8885.94128forward
CNT30688581Actinidia chinensisTriticum urartu31.3722.0385.94128forward
CNT30330871Actinidia chinensisDioscorea rotundata95.5953.9480.51390forward

Expression of CNT30559889

Peptides detected in this lncRNA

>peptide 1 (54 aa)
YKRVRLGYRMVRLGCRMEKLGCKMVKLGCKMAKWGCMQEKWGYMQEKWGCSWGM*

Sequence

>CNT30559889
CTATAAGAGGGTGAGGTTGGGCTATAGGATGGTGAGGTTGGGCTGTAGGATGGAGAAGTTGGGCTGTAAGATGGTGAAGTTGGGCTGTAAGATGGCGAAG
TGGGGCTGTATGCAGGAGAAGTGGGGCTATATGCAGGAGAAGTGGGGCTGTAGCTGGGGGATGTAGGACTATAACTGGGGGATGTGGGCGAGTAAGAAGG
ACTTGTAGGAGAATACGTAGGGCTAGTTGGACTATACCCTGGTGAGCTTGGACTATATGTCGGGGACGTCGGGCTGTAACCAGGTGATGTTGGGCTATAT
CCAGGAGAAGTTGGGCTATAACCAGGAGAGGTAGGACTATATCCAGGAGACGACGGACTATATCCAGGAGAAGAGGGGCTGTAACCAGGGGATGATGCAG
GAGAGAAG