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Detailed information on CNT30628927


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE:
NONGMAT000067, E-value = 3e-85

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30316118Vigna unguiculataCorylus avellana83.9365.8380.85470forward
CNT30516792Vigna unguiculataJuglans regia72.1445.3981.93404forward
CNT30376525Vigna unguiculataArabidopsis thaliana7051.2480.87392forward
CNT30616482Vigna unguiculataSesamum indicum61.9622.7579.83347forward
CNT3021339Vigna unguiculataCitrullus lanatus75.3666.5679.86422forward
CNT30307041Vigna unguiculataTriticum aestivum5052.2480.36280forward
CNT30400271Vigna unguiculataTriticum turgidum53.2160.280.2298forward
CNT30592011Vigna unguiculataMusa acuminata67.8693.8380380forward
CNT30508904Vigna unguiculataSolanum lycopersicum58.3952.9181.65327forward
CNT30554779Vigna unguiculataOryza glaberrima55.5433.2680.71311forward
CNT30256659Vigna unguiculataAvena sativa61.4348.1179.36344forward
CNT30312432Vigna unguiculataCamelina sativa53.9377.6382.78302forward
CNT3062262Vigna unguiculataArabidopsis lyrata60.8962.2380.35341forward
CNT30468525Vigna unguiculataSaccharum spontaneum61.4340.8181.4344forward
CNT3017147Vigna unguiculataZea mays54.4642.6683.28305forward
CNT3067979Vigna unguiculataLeersia perrieri49.6477.2280.94278forward
CNT30620243Vigna unguiculataCajanus cajan41.9670.7886.81235forward
CNT30154878Vigna unguiculataPrunus persica65.1871.5784.11365forward
CNT30642025Vigna unguiculataCannabis sativa58.2163.5580.06326forward
CNT30120999Vigna unguiculataCitrus clementina70.8929.5881.11397forward
CNT30149986Vigna unguiculataBrachypodium distachyon47.529.6580.45266forward
CNT30103173Vigna unguiculataOryza rufipogon55.5432.0380.71311forward
CNT30498009Vigna unguiculataDigitaria exilis57.6832.9981.42323forward
CNT30558075Vigna unguiculataPanicum hallii5539.0480.52308forward
CNT30551544Vigna unguiculataOryza brachyantha46.4337.4181.54260forward

Expression of CNT30628927

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MQVKWGYRQVKWDCMQVKSGCSWEKLGYNWVMWGCSWVM*

>peptide 2 (38 aa)
CSLGMWDYMDLMETILDCLENMPMKDCTLLTGDCNLGK*

Sequence

>CNT30628927
CTGTAGTTTGGGGATGTGGGACTATATGGACTTGATGGAGACAATCTTGGACTGCTTGGAGAATATGCCAATGAAGGACTGTACTTTGCTGACTGGGGAT
TGTAACTTGGGGAAGTAGGACTATACGATGGGGATGTTGGGCTATATGAGGGTGACGTAGGGCTGTAAGAGGGTGAAGTGGGGCTGTATGAAGGTGAGGT
AGGACTATATGAAGGTGACGTAGGGCTGTAGGAAGGTGAAGTGGGACTATATGCAGGTGAAGTGGGGCTATAGGCAGGTGAAGTGGGACTGTATGCAGGT
GAAGTCGGGCTGTAGCTGGGAGAAGTTGGGCTATAACTGGGTGATGTGGGGCTGTAGCTGGGTGATGTAGGACTGTAGCTGGGTGATGTTGGGCTATAGC
TGGGTGATGTGGGAGAGTAGGATGGACTGGTTGGCGAATAAGCCGGACTTGTAGGACTATATCCTGGAGAACTAGGGCTATACGTGGGAGAGGTCGGACT
GTAACCTGGTGATGTGGGACTGTAGCCCGGAGATGTAGGACTGTACCCAGGTGATGTGGG