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Detailed information on CNT30708359


BLAST search results

BLAST vs Swiss-Prot:
sp|Q32904|CB23_PEA, E-value = 2e-82

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30259100Glycine maxBrassica rapa36.6342.480.95315forward
CNT30217954Glycine maxKalanchoe fedtschenkoi14.8835.5682.81128forward
CNT30725730Glycine maxLupinus angustifolius39.7751.0485.67342forward

Expression of CNT30708359

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGVLSPEGSDQPCLEFQVLLHQLHPTLHNDH*

>peptide 2 (44 aa)
AQINKSLGTVNLTSKEITQERCRMFLVVLHVISYSATPRNKMST*

>peptide 3 (57 aa)
MNPPVPSGSESPRGDLGPRLCLAASAEKVREDDDTRACAAMLLIYNSSDAAKEGVFF*

Sequence

>CNT30708359
GGCTCAAATAAATAAAAGCTTAGGGACGGTTAATCTAACGAGCAAAGAGATAACACAAGAAAGATGTCGAATGTTTCTAGTTGTTTTACATGTCATTTCT
TACAGCGCCACACCAAGGAACAAAATGTCCACATGATATAGAAAGGTAGAAAGGTAGTTGAGTTTTGGCAACGTAAAGAATATGTAAAATAACATATAAT
ACATTCAGTGGAACTTGAGACTGGTCAAGATGAGTGGGTTGAAGAAAGGTCCTCCTGGATAAGCTGGCTCACCAGAACCTCCAAGACCCTTCTCTAGTCC
TAGGAAGTATTGTTTGCCCATAGAGCCTGGTTTGGCCCAGTCTTGGAATCTTCTGTGCTCTGCAAATCCCATCAGTGCCATCTCAAACACGAACAGTGTG
TAGGAGTCTGCCCAGTAGTTGTAGGTTCCTGCAGGTGGGAACACACCCGTTCTGAACCATGGGAGTGCTGTCTCCTGAGGGATCAGACCAGCCTTGCCTA
GAATTTCAGGTGCTATTGCACCAACTGCACCCAACATTGCATAACGACCATTGATTATCTCACCATATGCTAGCCATTTCGGCTCAATGAACCCTCCTGT
TCCTTCAGGGTCTGAAAGTCCCAGAGGTGATCTTGGTCCAAGACTTTGTCTTGCAGCCTCCGCTGAGAAGGTAAGAGAAGATGATGATACAAGAGCTTGT
GCAGCCATGCTCTTAATTTACAACTCCTCTGATGCAGCAAAAGAGGGGGTATTCTTCTAAAATGTGAAGTTGTACTCAATGGTTAGGAATAGCCAAAGGG
TGGAAGATATGGGGCACGCTGAGCCACTACCTTGGCCCGCATGTAAAAGCAGTATCGAAC