Detailed information on CNT3073350


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SQL2|CB24_PEA, E-value = 2e-20

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30631202Brassica junceaVigna unguiculata69.2279.6679.47380forward
CNT30233182Brassica junceaBrassica oleracea61.250.2299.4336forward
CNT30259100Brassica junceaBrassica rapa10073.8999.45549forward
CNT30217954Brassica junceaKalanchoe fedtschenkoi21.1332.2282.76116forward

Expression of CNT3073350

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MSLQVESHRFGTREEQCLQESDRPFLESQVQ*

>peptide 2 (55 aa)
MIISVELEAGQDIVVDGIRQMIKKYCLPIDPGLYQSCNLLCSANPIKAISRTKSV*

>peptide 3 (39 aa)
LTKDEYVYTGCYNTKKLMVPRETNKIVGYKRMGNQHKTP*

>peptide 4 (35 aa)
YKRRICLHRVLQHKETDGTKRNKQDCRIQENGKPT*

Sequence

>CNT3073350
CTTACAAAAGACGAATATGTTTACACAGGGTGTTACAACACAAAGAAACTGATGGTACCAAGAGAAACAAACAAGATTGTAGGATACAAGAGAATGGGAA
ACCAACATAAAACACCATGAGATGAATACGATATGATCATCTCAGTGGAACTTGAGGCTGGTCAAGACATTGTTGTTGACGGGATCCGCCAAATGATCAA
GAAGTATTGTTTACCCATAGATCCTGGGTTGTACCAGTCCTGCAACCTCCTGTGCTCAGCAAACCCCATCAAAGCCATCTCGAGAACAAAGAGTGTGTAA
GGGTCTGCCCAGTAGCTGTATGTCCCTGCAGGTGGAATCACACCGGTTTGGAACCAGGGAAGAGCAGTGTCTGCAGGAATCAGACCGGCCTTTCCTAGAA
TCTCAGGTGCAATAGCTCCAGCTGCACCCAACATAGCGAACCTCCCGTTGATGATCTCTCCGTAGGCTAGCCATCTCGGCTCGATGAAGCCTCCAGTACC
CTCTGGGTCTGAAAGACCAAGCGGATCGAATCCGAAGTCGCCAGGTAAG