SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 1826 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID

Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30115572 Oryza nivara 1:9957403-9958320 (-) coding (0.01)- 47 23.69 1Conserved counterparts:
CNT30115571 Oryza nivara 1:40979787-40980262 (-) noncoding (-0.004096)4e-41 (sp|Q5JLP4|CKX4_ORYSJ) 67 0 2Conserved counterparts:
CNT30115570 Oryza nivara 1:6128075-6128560 (+) noncoding (-0.232653)- 71 155.83 2
CNT30115568 Oryza nivara 1:39867383-39867621 (-) noncoding (-0.120832)- - 96.25 2
CNT30115566 Oryza nivara 1:21429650-21430624 (+) coding (0.114)- 75 0.1 3Conserved counterparts:
CNT30115565 Oryza nivara 1:9215160-9217590 (+) coding (0.062)- 96 4.61 3
CNT30115564 Oryza nivara 1:39314988-39320651 (-) noncoding (-0.0004096)- - 0 2Conserved counterparts:
CNT30115563 Oryza nivara 1:20756477-20757109 (+) coding (0.429)- - 0.44 3
CNT30115558 Oryza nivara 1:101753-102275 (-) coding (0.113)- 89 6.57 1
CNT30115557 Oryza nivara 1:30480326-30481204 (-) coding (0.192)9e-87 (sp|Q5JN63|CESA4_ORYSJ) 61 0 3
CNT30115555 Oryza nivara 1:30476323-30477404 (-) noncoding (-0.08192)6e-35 (sp|Q5JN63|CESA4_ORYSJ) - 0 2
CNT30115552 Oryza nivara 1:20328954-20329416 (+) noncoding (-0.0004096)- 41 134.16 1
CNT30115550 Oryza nivara 1:16068512-16071585 (-) noncoding (-0.155648)- 62 4.73 4Conserved counterparts:
CNT30115548 Oryza nivara 1:8294052-8296594 (-) coding (0.116)- 76 0.33 3Conserved counterparts:
CNT30115546 Oryza nivara 1:28497124-28498504 (-) noncoding (-0.446464)2e-16 (sp|Q9ZVN2|PES1_ARATH) 66 8.49 3
CNT30115545 Oryza nivara 1:27019484-27020804 (-) noncoding (-0.022528)1e-59 (sp|Q01859|ATPBM_ORYSJ) 32 0.4 2Conserved counterparts:
CNT30115544 Oryza nivara 1:5095931-5096797 (+) noncoding (-0.0212992)- 81 25.08 3Conserved counterparts:
CNT30115543 Oryza nivara 1:33262633-33264390 (+) coding (0.336)2e-52 (sp|Q9SKJ7|PT225_ARATH) 69 23.26 3Conserved counterparts:
CNT30115542 Oryza nivara 1:12452993-12454085 (-) noncoding (-0.0626688)- 67 0 3
CNT30115541 Oryza nivara 1:25528550-25529220 (+) coding (0.153)- 81 1.24 2Conserved counterparts:
CNT30115540 Oryza nivara 1:9926005-9927912 (+) noncoding (-0.233472)- 49 4.05 3
CNT30115537 Oryza nivara 1:16422874-16423607 (+) coding (0.08)- 55 5.45 1Conserved counterparts:
CNT30115535 Oryza nivara 1:23492122-23493438 (-) noncoding (-0.012288)- 64 3.81 2
CNT30115534 Oryza nivara 1:37949293-37950079 (+) noncoding (-0.151552)- - 0.4 2
CNT30115533 Oryza nivara 1:28013056-28013388 (+) noncoding (-0.0045056)- 78 52.51 1
CNT30115532 Oryza nivara 1:26701179-26701394 (-) noncoding (-0.0004096)- 60 19.68 1
CNT30115531 Oryza nivara 1:28261795-28270314 (+) noncoding (-0.0004096)- 42 22.62 2
CNT30115530 Oryza nivara 1:17380821-17381586 (+) noncoding (-0.049152)- 59 9.59 1
CNT30115529 Oryza nivara 1:10949907-10950195 (-) noncoding (-0.197018)- 81 0 2Conserved counterparts:
CNT30115528 Oryza nivara 1:13401804-13402996 (+) noncoding (-0.0004096)- 46 30.36 2Conserved counterparts:
CNT30115527 Oryza nivara 1:18710461-18713584 (-) noncoding (-0.0126976)- 63 5.26 4
CNT30115526 Oryza nivara 1:583407-584391 (-) noncoding (-0.0868352)- 45 65.99 3Conserved counterparts:
CNT30115525 Oryza nivara 1:8294052-8296594 (-) coding (0.113)- 75 5.66 3Conserved counterparts:
CNT30115521 Oryza nivara 1:27893900-27895108 (-) noncoding (-0.02048)- 61 54.8 2Conserved counterparts:
CNT30115518 Oryza nivara 1:18531250-18533387 (-) coding (0.322)4e-43 (sp|Q9FJZ9|PER72_ARATH) 59 0.11 2Conserved counterparts:
CNT30115516 Oryza nivara 1:39376974-39378987 (-) noncoding (-0.0004096)- 55 18.26 2
CNT30115515 Oryza nivara 1:27876996-27878377 (-) coding (0.279)1e-77 (sp|Q94JG1|NRT23_ORYSJ) 80 118.22 2
CNT30115514 Oryza nivara 1:11943514-11943989 (+) coding (0.143)- 79 33.93 1Conserved counterparts:
CNT30115513 Oryza nivara 1:26752060-26752381 (+) noncoding (-0.0499712)- 41 0.26 2Conserved counterparts:
CNT30115512 Oryza nivara 1:5175266-5179205 (-) noncoding (-0.04096)- 86 16.18 2Conserved counterparts:
CNT30115511 Oryza nivara 1:15956758-15957770 (+) noncoding (-0.311296)- 51 123.05 2Conserved counterparts:
CNT30115509 Oryza nivara 1:34268559-34277205 (-) noncoding (-0.077824)1e-21 (sp|P35135|UBC4_SOLLC) 37 390.99 2Conserved counterparts:
CNT30115505 Oryza nivara 1:42348781-42349206 (+) noncoding (-0.147456)6e-50 (sp|Q6ENH4|PSAA_ORYNI) 37 18437.8 1Conserved counterparts:
CNT30115504 Oryza nivara 1:21429650-21430624 (+) coding (0.258)- 96 0 3Conserved counterparts:
CNT30115503 Oryza nivara 1:20064357-20067174 (-) noncoding (-0.0253952)- 87 44.9 2Conserved counterparts:
CNT30115502 Oryza nivara 1:37711305-37713129 (+) noncoding (-0.069632)- 97 153.14 2Conserved counterparts:
CNT30115500 Oryza nivara 1:42644301-42645124 (-) noncoding (-0.02048)- - 2.85 2Conserved counterparts:
CNT30115498 Oryza nivara 1:10949775-10950645 (-) noncoding (-0.0565248)2e-78 (sp|Q6SJV8|CRD1_GOSHI) 51 18.22 2Conserved counterparts:
CNT30115497 Oryza nivara 1:38395092-38396277 (-) coding (0.292)- 81 3.86 2
CNT30115496 Oryza nivara 1:19788078-19788651 (-) noncoding (-0.0004096)- 37 7.08 2