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Detailed information on CNT3014813


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5EFU4|CRD1_HORVU, E-value = 2e-64

BLAST vs NONCODE:
NONGMAT001508, E-value = 2e-20

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30675451Zea maysSetaria viridis37.9330.2296.36110forward
CNT30293788Zea maysTriticum aestivum63.4573.696.2184forward
CNT30342208Zea maysEragrostis tef62.0756.2595180forward
CNT30363182Zea maysSorghum bicolor63.4557.3296.74184forward
CNT30595630Zea maysOryza meridionalis44.1457.1492.97128forward
CNT30360756Zea maysLactuca sativa28.9712.4188.184forward
CNT3036024Zea maysCucumis melo35.528.5885.44103forward
CNT30149182Zea maysBrachypodium distachyon61.0351.1693.22177forward
CNT3099936Zea maysOryza rufipogon47.9327.6992.81139forward
CNT30574872Zea maysOryza barthii47.9323.1392.81139forward
CNT30557835Zea maysPanicum hallii8037.5497.41232forward
CNT30550454Zea maysOryza brachyantha49.6613.1195.14144forward
CNT30115390Zea maysEutrema salsugineum46.925.2886.76136forward

Expression of CNT3014813

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MNLGLKKVYFLALVRNPRSSAKLKSDSPLFKN

Sequence

>CNT3014813
CGAGAGGCAGAAGAACCGTGACCAGAGCTTGGCCTTCCAGTCATTGAGGAACTGCGGCTGAGCCTTGAGCAGGGCAGAGAAGAAGTCGCCGTGCCTGTTC
TCGTCCTGGCACCAGTTCTCGAAGTACTTGAAGATGGGGTACACCTGGTACTCCGGGTTCGCCTTGAGGTGCCTGAAGATGGTGGCGTAGAAGATGAACT
TGGGCTTGAAGAAGGTGTACTTCCTAGCCTTGGTCAGGAACCCCAGGTCCAGCGCCAAGTTGAAGTCAGACAGCCCCTTGTTCAAGAACC