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Detailed information on CNT30595633


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690383Oryza meridionalisOryza sativa90.7744.0398.31295forward
CNT30672671Oryza meridionalisSetaria viridis28.9223.2190.4394forward
CNT30520803Oryza meridionalisSetaria italica28.9221.2291.4994forward
CNT30286278Oryza meridionalisTriticum aestivum26.1529.1189.4185forward
CNT30383152Oryza meridionalisTriticum turgidum26.1513.689.4185forward
CNT30552437Oryza meridionalisOryza glaberrima68.9253.0897.77224forward
CNT30255378Oryza meridionalisAvena sativa25.5419.5390.3683forward
CNT30655558Oryza meridionalisTriticum dicoccoides26.1522.3789.4185forward
CNT3015104Oryza meridionalisZea mays26.4626.0689.5386forward
CNT30678966Oryza meridionalisTriticum urartu26.1516.5789.4185forward
CNT30719808Oryza meridionalisTriticum spelta26.1519.9589.4185forward
CNT30369401Oryza meridionalisOryza glumipatula64.9247.8598.1211forward
CNT30148777Oryza meridionalisBrachypodium distachyon27.089.8890.9188forward
CNT3099956Oryza meridionalisOryza rufipogon90.7727.5297.97295forward
CNT30574749Oryza meridionalisOryza barthii66.7757.4197.7217forward
CNT30115817Oryza meridionalisOryza nivara67.0844.0497.71218forward

Expression of CNT30595633

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MELLSCWPEEQWQPHPALFIATHTTPTDHQ*

Sequence

>CNT30595633
CGATTATGTAAGGAATTTTATTTAGGGGCCAGGTAGCTCGTTGATCAGGTGTGGATTGGATAGAGATAAGTTTCTTCTAGTTGCAGTTGCAGCAGGAGCA
GCCGCAGCTGGTGCCGCACTTGCAGCTGGAGCCGCATCCGCAGTTGCCACCGCAGCACGACATGGTGATGATGATGACAGCTTCTTCTTCCTTCTCTGGC
CTTGTCGGCAACTAGCTGCTGCTTACTTGTATGGAGCTTCTTAGTTGCTGGCCTGAGGAGCAATGGCAACCGCACCCTGCCCTATTTATAGCCACCCACA
CTACACCCACGGATCATCAGTAGTG