Detailed information on CNT3015355


BLAST search results

BLAST vs Swiss-Prot:
sp|Q5EFU4|CRD1_HORVU, E-value = 2e-59

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30375469Zea maysArabidopsis thaliana5017.3185.93135forward
CNT30222759Zea maysHordeum vulgare54.8129.6693.92148forward
CNT3099688Zea maysOryza rufipogon10057.9493.7270forward
CNT30574876Zea maysOryza barthii10096.0993.7270forward
CNT30115529Zea maysOryza nivara90.3710093.03244forward

Expression of CNT3015355

Peptides detected in this lncRNA

>peptide 1 (28 aa)
MNLGLKKVYFLALVRNPRSSAKLKSDSPL

Sequence

>CNT3015355
AGGCAGAAGAACCGTGACCAGAGCTTGGCCTTCCAGTCATTGAGGAACTGCGGCTGAGCCTTGAGCAGGGCAGAGAAGAAGTCGCCGTGCCTGTTCTCGT
CCTGGCACCAGTTCTCGAAGTGCCTGAAGATGGTGATGTACCTCCAGTACCCGATCTTCTCGGACAGGTAGGTGGCGTAGAAGATGAACTTGGGCTTGAA
GAAGGTGTACTTCCTAGCCTTGGTCAGGAACCCCAGGTCCAGCGCCAAGTTGAAGTCAGACAGCCCCTTG