SEARCH OPTIONS

lncRNA id
CNCI status
Max. peptide length
Is conserved?
Organ-specific expression:
Max. expression
No. of exons
Order results by

Current search details:

Found 2749 records

CNCI status:   #
Max. peptide length:   #
Is conserved:   #
Organ specific:   #
Max. expression:   #
No. of exons:   #
Order by:   lncRNA ID


Record details CANTATAdb ID Species Location CNCI status (score) Swiss-Prot best hit Max. peptide length Max. expression No. of exons Notes
CNT30523010 Setaria italica V:3662812-3663180 (-) noncoding (-0.0483328)- 100 2.51 2Conserved counterparts:
CNT30523009 Setaria italica V:38862413-38863269 (+) noncoding (-0.0094208)- 71 5.59 2
CNT30523007 Setaria italica V:44833862-44838157 (-) coding (0.05)6e-49 (sp|P10978|POLX_TOBAC) 84 2.33 1
CNT30523006 Setaria italica V:35812465-35813732 (+) coding (0.327)3e-46 (sp|B6UI56|OBP2B_MAIZE) 47 123.25 2
CNT30523003 Setaria italica V:2357347-2358297 (-) coding (0.176)- 76 10.25 2
CNT30523001 Setaria italica V:1401927-1402417 (-) noncoding (-0.192512)- 41 1.22 2
CNT30522998 Setaria italica V:34725370-34728804 (-) noncoding (-0.0004096)- 42 8.38 6
CNT30522997 Setaria italica V:45799182-45799579 (-) noncoding (-0.008192)- 56 0 2
CNT30522996 Setaria italica V:251341-252055 (-) coding (0.55)- 95 0.34 2
CNT30522995 Setaria italica V:3725213-3725963 (-) coding (0.348)- 75 294.46 1
CNT30522994 Setaria italica V:40703671-40704454 (+) coding (0.286)1e-56 (sp|Q75L11|H2A6_ORYSJ) 72 55.64 2
CNT30522992 Setaria italica V:9094189-9094875 (-) coding (0.04)8e-46 (sp|Q6ZBP3|H2B2_ORYSJ) 76 0.79 2Conserved counterparts:
CNT30522990 Setaria italica V:44220449-44221646 (+) coding (0.176)- 44 0.44 3Conserved counterparts:
CNT30522989 Setaria italica V:44220449-44221646 (+) coding (0.133)1e-113 (sp|P17784|ALFC1_ORYSJ) 73 1057.64 2Conserved counterparts:
CNT30522988 Setaria italica V:46030054-46030844 (-) noncoding (-0.0147456)- - 14.03 3
CNT30522987 Setaria italica V:2082351-2084222 (+) noncoding (-0.0385024)- 79 5.23 2
CNT30522986 Setaria italica V:42719380-42719908 (+) coding (0.172)- 98 25.3 1
CNT30522984 Setaria italica V:38283687-38284115 (+) noncoding (-0.0663552)- 53 1.51 2
CNT30522983 Setaria italica V:27193861-27194388 (-) coding (0.305)- 74 0.48 2Conserved counterparts:
CNT30522980 Setaria italica V:45696295-45697634 (+) coding (0.235)5e-38 (sp|O04133|SRC2_SOYBN) 64 8.28 2Conserved counterparts:
CNT30522978 Setaria italica V:40129527-40129969 (+) coding (0.243)2e-17 (sp|A0A7G2A2Z3|NLTP_MACIN) 92 1.04 2Conserved counterparts:
CNT30522977 Setaria italica V:6615958-6618600 (+) coding (0.021)- 91 12.51 3
CNT30522974 Setaria italica V:22907967-22909050 (+) noncoding (-0.0004096)- 45 295.09 1
CNT30522973 Setaria italica V:46887702-46891975 (-) coding (0.42)5e-33 (sp|P84516|PER1_SORBI) 84 0 2
CNT30522972 Setaria italica V:39210418-39210740 (-) noncoding (-0.0069632)- 100 0 2
CNT30522971 Setaria italica V:44435327-44436110 (+) coding (0.37)- 60 931.84 2
CNT30522970 Setaria italica V:7604609-7605959 (-) coding (0.26)- 89 1.13 3Conserved counterparts:
CNT30522969 Setaria italica V:19547096-19548668 (-) coding (0.293)- 92 9.39 3
CNT30522968 Setaria italica V:45696231-45697661 (+) coding (0.26)0.000001 (sp|Q9M2T2|PP16A_ARATH) 50 0.49 3Conserved counterparts:
CNT30522967 Setaria italica V:43099711-43100396 (+) noncoding (-0.206438)- 81 4.06 2
CNT30522966 Setaria italica V:46465303-46466081 (-) coding (0.26)- 95 0.47 2Conserved counterparts:
CNT30522964 Setaria italica V:7316451-7317634 (-) coding (0.21)3e-29 (sp|P07679|IBB1_COILA) 70 410.88 2
CNT30522963 Setaria italica V:46278791-46279223 (+) noncoding (-0.02048)- 58 44.5 2
CNT30522960 Setaria italica V:3809871-3813918 (-) coding (0.481)- 72 3.19 2
CNT30522956 Setaria italica V:43099903-43100366 (+) noncoding (-0.234701)8e-31 (sp|Q9LVM2|NDHN_ARATH) 73 73.17 2
CNT30522955 Setaria italica V:42197243-42198261 (+) coding (0.32)0.000000000003 (sp|Q9SJ52|NHL10_ARATH) 48 210.18 2
CNT30522954 Setaria italica V:7662224-7662705 (-) coding (0.347)- 100 9.95 2
CNT30522951 Setaria italica V:46901393-46902431 (-) coding (0.343)- 98 8.96 2Conserved counterparts:
CNT30522946 Setaria italica V:39031395-39032122 (+) coding (0.233)- 77 37.09 2
CNT30522945 Setaria italica V:7604890-7605491 (-) coding (0.318)0.000001 (sp|Q8W4I5|ERF69_ARATH) 38 0.24 2Conserved counterparts:
CNT30522942 Setaria italica V:31453017-31453569 (-) noncoding (-0.004096)5e-16 (sp|P51614|CHIT3_VITVI) 36 0 2Conserved counterparts:
CNT30522940 Setaria italica V:9079682-9080408 (+) noncoding (-0.0528384)3e-32 (sp|Q41575|H2B6_WHEAT) 69 127.57 2Conserved counterparts:
CNT30522939 Setaria italica V:36775841-36776564 (+) noncoding (-0.0004096)- 74 0 2Conserved counterparts:
CNT30522937 Setaria italica V:22565073-22566358 (+) noncoding (-0.024576)- 35 5.34 2
CNT30522936 Setaria italica V:31853283-31853943 (+) coding (0.257)0.00000002 (sp|Q93YU8|NRG2_ARATH) 68 27.2 2
CNT30522934 Setaria italica V:23390162-23390722 (+) noncoding (-0.0167936)0.000000002 (sp|Q9SAF8|DVL4_ARATH) 57 3.14 2
CNT30522932 Setaria italica V:11687426-11688159 (+) noncoding (-0.004096)- 68 8.04 3
CNT30522927 Setaria italica V:42284151-42284384 (-) coding (0.484)1e-20 (sp|Q43139|F16P2_SACHY) 67 142.79 2
CNT30522925 Setaria italica V:30425218-30426219 (-) noncoding (-0.057344)5e-72 (sp|O64477|Y2913_ARATH) 67 6.22 1
CNT30522924 Setaria italica V:45395676-45396135 (+) noncoding (-0.077824)- 39 0.26 2Conserved counterparts: