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Detailed information on CNT3099451


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30603476Oryza rufipogonOryza punctata29.6924.7288.94217forward

Expression of CNT3099451

Peptides detected in this lncRNA

>peptide 1 (53 aa)
VYRNHSTYIDVRTHIHWFGIRRAAAAAKLWVSNVYTCTYVHPCSSYCTVYIRT*

>peptide 2 (77 aa)
RLQKSQYIYRCTYTHTLVWNKARGRGGEIVGEQRIYVYVRTSLLILLYRIYTYVVASIYLVVRTYAWIINNLGVINN*

>peptide 3 (99 aa)
MAALLPHQVLLRVHGVVPPPTVDLAALAVVVVGVGLHPHATMPVPVPVTVAVPVAVLPAGGLVALVHGAGVVLRHCWSVSLLQLATSPIRWWCKGSSLLC

Sequence

>CNT3099451
CGTTTACAGAAATCACAGTACATATATAGATGTACGTACACACATACACTGGTTTGGAATAAGGCGCGCGGCCGCGGCGGCGAAATTGTGGGTGAGCAAC
GTATATACGTGTACGTACGTACATCCTTGCTCATCTTATTGTACCGTATATATACGTACGTAGTAGCCAGTATTTATTTAGTGGTACGTACGTACGCATG
GATTATTAATAATTTGGGGGTGATTAATAATTAATCAGTTGCAGTAGTAGCCCTGCTGCTGCGGCATCCTGGCGTAGCCGTACTGCTGCTCCTTGGCGCC
GTAGCTGGCCTGCTTCTGCTCGCGGTGCTCGTGGGCGCCGATCTCGCCGACGCGCTCGCGCTGCTTGTGCTCGCGCTCCTCCCGCTTGTAGTACTCCTGC
TGCTGGCCGCCGCCGTAGCCGTAGCCGCCATGGCCGCTCTGCTGCCTCATCAGGTACTCCTGCGAGTGCATGGAGTTGTTCCTCCTCCCACGGTCGATCT
CGCCGCCCTCGCTGTAGTAGTCGTCGGTGTGGGACTCCACCCTCATGCCACCATGCCCGTGCCCGTGCCCGTGACCGTGGCCGTGCCCGTGGCCGTGCTG
CCTGCCGGTGGTCTCGTAGCACTCGTCCACGGTGCTGGAGTAGTACTCCGCCATTGTTGGTCGGTTTCTCTCCTGCAGCTAGCTACTTCTCCGATCAGGT
GGTGGTGCAAGGGAAGTTCTTTGCTTTGCTT