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Detailed information on CNT30603476


BLAST search results

BLAST vs Swiss-Prot:
sp|P37220|ASR3_SOLLC, E-value = 2e-08

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690397Oryza punctataOryza sativa13.923.1195.08122forward
CNT30595620Oryza punctataOryza meridionalis25.9762.4784.21228forward
CNT3099451Oryza punctataOryza rufipogon24.2629.1488.73213forward

Expression of CNT30603476

Peptides detected in this lncRNA

>peptide 1 (76 aa)
MAALLPHQVLLRVHGVGPPATVDLAALAVVVVGVGLHPHAAMAVAVAVTVTVAVAMLPAGGLVALVDGARVVVRHC*

>peptide 2 (96 aa)
ACYLQPIARYDGAGAGDIEKTISLEINSLYYHSRIHRSGWYTGLQYIDVHTYSGWNKAAAKLRVSNVYVHPCSSYCTPYVVDSIYLVTRRYAWIMC*

Sequence

>CNT30603476
CGCCTGTTACTTACAGCCCATCGCTAGATATGACGGCGCCGGCGCCGGTGATATAGAGAAGACGATCTCGTTGGAAATTAATAGTCTTTATTATCACAGT
AGAATTCATCGATCCGGGTGGTACACAGGTTTACAGTACATAGACGTACACACATACTCTGGTTGGAATAAGGCGGCGGCGAAATTGCGGGTGAGCAACG
TATACGTACATCCTTGCTCATCTTATTGTACACCGTACGTAGTAGACAGTATTTATTTAGTGACACGTAGGTACGCATGGATCATGTGTTAATTGTGGGT
GATTAGTTGCAGTAGTAGCCCTGCTGCGGCATCCTGCCGTAGCCGTACTGCTGCTCCTTGGCGCCATAGCTGGCCTCCTTCTGCTCGCGGTGCTCGTGGT
AGGCGTAGCCGCCGGCGCCCAGCGCCGCCGCCGCCGCCACGCCCTGCTCGATCCTGTGCCTCTGCGCGTTCGCCGGGTCCTTCTTCGCCTGAGCGAAGGC
GCCGCTGGCGAGGGCGCCGATCTCGCCGACGCGCTCGCGCTGCTTGTGCTCACGTTCCTCCCTCTTGTAGTACTCCTGCTGGCCGCCGCCGCCATGGCCG
CTCTGCTGCCTCATCAGGTACTCCTGCGAGTGCATGGAGTTGGTCCTCCGGCCACGGTCGACCTCGCCGCCCTCGCAGTAGTAGTCGTCGGTGTGGGACT
GCACCCTCATGCCGCCATGGCCGTGGCCGTGGCCGTGACCGTGACCGTGGCCGTGGCCATGCTGCCTGCCGGTGGTCTCGTAGCACTCGTCGACGGTGCT
CGAGTAGTAGTCCGCCATTGTTGATCGGTTTCTCTCCTGCAGCTAGTTCTCTGATCAGGTGGTGGTGCAAGTGAAGTT