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Detailed information on CNT30575063


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552314Oryza barthiiOryza glaberrima10061.2797.61753forward
CNT3099633Oryza barthiiOryza rufipogon95.0998.7697.35716forward

Expression of CNT30575063

Peptides detected in this lncRNA

>peptide 1 (47 aa)
IFFSEVSKQHVLSEEYVLFAIHVSRHIGDIQSIQPSSEIHRVNVRQL*

Sequence

>CNT30575063
ATCTTCTTCAGCGAAGTCTCCAAGCAGCATGTCCTCAGTGAAGAGTACGTCTTGTTCGCCATTCATGTAAGCCGGCACATCGGAGATATCCAGAGCATCC
AGCCCAGCTCGGAAATCCATCGGGTCAATGTCCGGCAGCTGTAGACCGCGCAGTATATCCTTGTAGAACTCTGGGTCATCCGGCAGCTCGGCGGTCTCGT
TGGTAGCCTCCACCAGGAGGGGAGTTGCAGCTTGCTCCGGCAGCGGCGGCGACTCTGGCTTTGGAGCTGGCTTGGTGGCTTCGAGCACAGACGACGGCGA
AGGGTGGGCGAATGGCGCGGCAGAAGTCGAGGACGACGAGGACGCAGTCGGAGTAGGGGTCGCCGAACTAGCAGGTGAGGCAGAGGAGGCGCACACCACG
GTAGCAGGTGCTCCCAACCTTGCCGATGTTGGCGTAGGCAGCGACGGTGGACGCCGGAGAGGCCTGCTTCGTCGACGAAGCTGGCTTGCCAATGAAGAGC
TCAAAGTAGCGCTTCTTTGAGGCGGCGCCGGCGTCCTCGTCGTCGTCAGAGTCGGAGTCCGTCGCGTCAGGGTCCTCGAACACGACGCGGACGCGACGGC
TTGGCTGCAGGGAGGCCGCCGCCGACGGCACATGGGGCCTGGAGAAAGCAGCAGAGGGTTTAAGGCCAAACCCGGATAGCCTCTTCGTCTTGGGCTTCTT
CGCCATCACCTTCTTGAGGAGCATCTGCTGCTGCTTGGAAGGGGCCATTTCTC