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Detailed information on CNT30711423


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 1e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30405509Glycine maxBeta vulgaris55.1122.683.3545forward
CNT30233458Glycine maxBrassica oleracea22.9585.3482.82227forward
CNT3082076Glycine maxBrassica juncea56.1266.9580555forward
CNT30597278Glycine maxFraxinus excelsior34.0766.8781.6337forward
CNT30625265Glycine maxDaucus carota35.5939.4280.68352forward
CNT30621314Glycine maxCajanus cajan61.6848.3789.51610forward
CNT3027741Glycine maxTheobroma cacao24.6755.8484.02244forward

Expression of CNT30711423

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MGVLSPEGSDQPCLEFQVLLHQLHPTLHNDH*

>peptide 2 (52 aa)
KEQREDIERWLSFGNCEANKNQDQEGKEYDIIHLVELETGQDVVVHGVSQMI*

Sequence

>CNT30711423
AAAGAGCAAAGAGAGGATATAGAAAGGTGGTTGAGCTTTGGTAACTGCGAAGCGAACAAGAACCAAGACCAAGAGGGTAAAGAATATGATATAATACATT
TAGTGGAACTTGAGACTGGTCAAGATGTTGTTGTGCACGGGGTCAGCCAAATGATCTAGGAGGTTTTGGTATGGGCCAACACCTGTGACAAGAGCTTGAA
CAAAGTAACCCAAGATTGCCAACATAGCCAACCTTCCATTCTTCACTTCCTTGAGCTTCAAATCCTTCAAGGACTTCTCATCCTTACCAAAGCCAAGTGG
GTTGAAGAAAGTCCTAGGAAGTATTGTTTGCCCATAGAGCCTGGTTTGGCCCAGTCTTGGAATCTTCTGTGCTCTGCAAATCCCATCAGTGCCATCTCAA
ACACGAACAGTGTGTAGGAGTCTGCCCAGTAGTTGTAGGTTCCTGCAGGTGGGAACACACCGGTTCTGAACCATGGGAGTGCTGTCTCCTGAGGGATCAG
ACCAGCCTTGCCTAGAATTTCAGGTGCTATTGCACCAACTGCACCCAACATTGCATAACGACCATTGATTATCTCACCATATGCTAGCCATTTCGGCTCA
ATGAACCCTCCTGTTCCTTCAGGGTCCGAAAGTCCCAGAGGGTCAAATCCATAGTCACCCGGAAGGCTGCAATGCACATGATGCCAGATAAAGTCAATTT
CAGCACCAGCATAGTAACTAATTATTTACTTCTCTTCTAAATTGCATAGATACACTAGTGTTATTCGAACAAGGTTCCCAGGAACGGAATAAAATGAATT
AAGTTTCTTTCATAAGTTTATTGGAGAAATTAAGCGAAAGAGCTACTATAAATTAACTTAATTATGTTTTAACTCATGAAATAAACTTCATTTTACCTTT
TTATTCTTCAAGTGCTCATGAGAAGTTTATATATCCAGACATGATCATATCGTTATGTTAAGCTATTGATGAACTAGGATGAAATTTAC