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Detailed information on CNT30524746


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 2e-51

BLAST vs NONCODE:
NONGMAT001209, E-value = 3e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677458Phaseolus vulgarisSetaria viridis11.1723.5484.16101forward
CNT30513779Phaseolus vulgarisJuglans regia12.8326.1985.34116forward
CNT30373597Phaseolus vulgarisArabidopsis thaliana39.657.5679.89358forward
CNT30618329Phaseolus vulgarisSesamum indicum32.8524.0978.11297forward
CNT30727223Phaseolus vulgarisCorchorus capsularis32.7421.181.42296forward
CNT30381982Phaseolus vulgarisManihot esculenta17.1531.1980.65155forward
CNT30708635Phaseolus vulgarisGlycine max41.1565.3889.52372forward
CNT30223457Phaseolus vulgarisHordeum vulgare11.8435.9182.24107forward
CNT30392788Phaseolus vulgarisTriticum turgidum26.4418.3678.66239forward
CNT30586176Phaseolus vulgarisMusa acuminata26.3339.0280.25238forward
CNT3084637Phaseolus vulgarisVigna radiata41.2632.4194.1373forward
CNT30542059Phaseolus vulgarisBrassica napus26.8830.4581.48243forward
CNT30239005Phaseolus vulgarisBrassica oleracea26.8824.3281.48243forward
CNT30146734Phaseolus vulgarisMedicago truncatula24.6736.0886.55223forward
CNT30662885Phaseolus vulgarisTriticum dicoccoides6.4225.4489.6658forward
CNT30310654Phaseolus vulgarisCamelina sativa29.3167.4380.38265forward
CNT301194Phaseolus vulgarisZea mays11.1720.2482.18101forward
CNT30229501Phaseolus vulgarisAnanas comosus13.3820.3780.99121forward
CNT3066802Phaseolus vulgarisLeersia perrieri6.7525.7486.8961forward
CNT30623609Phaseolus vulgarisDaucus carota25.1140.3980.18227forward
CNT30619970Phaseolus vulgarisCajanus cajan22.7953.6587.86206forward
CNT30423736Phaseolus vulgarisPapaver somniferum25.1127.7580.62227forward
CNT30643380Phaseolus vulgarisCannabis sativa12.2823.5783.78111forward
CNT3057351Phaseolus vulgarisAmborella trichopoda36.538.7879.09330forward
CNT30113848Phaseolus vulgarisFicus carica33.7439.5181.97305forward
CNT3050792Phaseolus vulgarisCucumis sativus34.7331.4680.25314forward

Expression of CNT30524746

Peptides detected in this lncRNA

>peptide 1 (32 aa)
HRFNTKGTTRESRMKKNRMKRTYTEEDRREIQ*

>peptide 2 (86 aa)
MLPPMKAPKVTAGPNAWAMEAEMRPAGVAAPLSVSLLKAMPEPEPANTKMRVEMNSARPAFNVSGLVASSGLPMAMFLIGIFNQRR*

>peptide 3 (38 aa)
MAAPEKAPPNKMLAPTMKPMAMGAMVPKLPLLGSMAVA*

Sequence

>CNT30524746
CACCGATTCAACACGAAAGGAACAACCCGGGAAAGTAGAATGAAGAAAAACAGAATGAAAAGAACATACACAGAAGAAGATCGAAGAGAAATTCAATGAT
ACAGATTTTTTTTTTGTTTATTTTTGTGATTTCTGGGTCTAGTAGTCAGTGGTTGGGAGCTGCTCGTGGGTGTGGCTGATGAAGACGACCTCGTAGATAA
GCCCAGCAAGACCACCACCGATGAGAGGGCCAACCCAGTAGATCCAGTTGTTGGTCCAGGTCCAGCTAACAACGGCGGGCCCGAATGTGACTGCAGGGTT
CATGGCTGCTCCGGAGAAGGCCCCACCCAACAAAATGTTAGCGCCAACGATGAAACCAATGGCGATGGGTGCGATGGTTCCCAAACTACCTCTCTTGGGG
TCAATGGCGGTAGCGTAGACAGTGTAAACCAAACCGAAGGTCATCACGATCTCCAACACCAAAGCGTTACCCACTCCAACTCCAGCTGAGAGTCCAAATG
CGGGAACAGAGGAGGGAGGCCACCACGGAGCCAAGGAGCTGGGCGATGATGTAGACGACACCGCGGAGAAAGGTGATGTTGCCTCCGATGAAGGCGCCGA
AGGTGACGGCGGGGCCGAATGCGTGGGCGATGGAGGCGGAGATGAGACCGGCAGGTGTGGCGGCGCCGTTGTCGGTAAGCTTGTTGAAGGCGATGCCGGA
ACCCGAGCCGGCGAACACGAAGATGAGGGTGGAGATGAACTCAGCCAGACCCGCCTTCAATGTGTCGGGGTTAGTGGCCTCCTCGGGCCTTCCGATGGCG
ATGTTTCTGATCGGCATCTTCAATCAACGGCGGTGATGATTACGACTGGTGAAAGATCAGGTGAATACCGATCACTCACTTAAATCACTCTCTGTTTCGC
TGCC