« Back to Cajanus cajan search


Detailed information on CNT30619970


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9FY14|TIP1_MEDTR, E-value = 1e-51

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30514098Cajanus cajanJuglans regia44.2742.9382.35170forward
CNT30374650Cajanus cajanArabidopsis thaliana26.323.1185.15101forward
CNT30618331Cajanus cajanSesamum indicum22.1410.187.0685forward
CNT30381982Cajanus cajanManihot esculenta30.7323.7483.9118forward
CNT30524746Cajanus cajanPhaseolus vulgaris53.6522.7987.86206forward
CNT30712512Cajanus cajanGlycine max81.2581.0491.35312forward
CNT3084586Cajanus cajanVigna radiata53.6514.4887.86206forward
CNT30146630Cajanus cajanMedicago truncatula51.344.7784.26197forward
CNT30662885Cajanus cajanTriticum dicoccoides13.0221.939450forward
CNT30322744Cajanus cajanAsparagus officinalis18.2320.7188.5770forward
CNT30724837Cajanus cajanLupinus angustifolius37.7617.3281.38145forward

Expression of CNT30619970

Peptides detected in this lncRNA

>peptide 1 (65 aa)
SGDEGQEQGGHDGPQELGDDVRDAAKEGDVAAHEEGECMGDGGGDQTSGGGGAVVGELVVGDAGA*

>peptide 2 (60 aa)
EAVTKARSKEATMDPRSWAMTYAMPRRKVMLPPTKRANAWAMAAEIRPAGVAAPLSVSLL*

>peptide 3 (29 aa)
MLRIGIFHYADRFSLLTSHFSLLTSHSTLC

Sequence

>CNT30619970
GAAGCGGTGACGAAGGCCAGGAGCAAGGAGGCCACGATGGACCCCAGGAGCTGGGCGATGACGTACGCGATGCCGCGAAGGAAGGTGATGTTGCCGCCCA
CGAAGAGGGCGAATGCATGGGCGATGGCGGCGGAGATCAGACCAGCGGGGGTGGCGGCGCCGTTGTCGGTGAGCTTGTTGTAGGCGATGCCGGAGCCTGA
ACCGGCGAAGACGAAGATGAGCGTGGAGATGAACTCAGCCAACGCCGCCTTCAACGTGTCGGGGTGAGTTACCTCTTCGGGCCTTCCAACGGCGATGTTA
CGGATCGGCATCTTCCACTACGCTGATCGCTTCTCACTTCTCACTTCTCACTTCTCACTTCTCACTTCTCACTCAACTCTCTGT