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Detailed information on CNT30662885


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 8e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677491Triticum dicoccoidesSetaria viridis34.2122.5496.1578forward
CNT30522256Triticum dicoccoidesSetaria italica58.7728.6388.81134forward
CNT30547910Triticum dicoccoidesIpomoea triloba31.5811.2387.572forward
CNT30514098Triticum dicoccoidesJuglans regia26.7515.488.5261forward
CNT30524746Triticum dicoccoidesPhaseolus vulgaris25.446.4289.6658forward
CNT30628528Triticum dicoccoidesVigna unguiculata24.126.289.0955forward
CNT30223741Triticum dicoccoidesHordeum vulgare57.0233.3397.69130forward
CNT30390967Triticum dicoccoidesTriticum turgidum74.5626.77100170forward
CNT30568703Triticum dicoccoidesActinidia chinensis32.894.5393.3375forward
CNT3084586Triticum dicoccoidesVigna radiata25.444.0887.9358forward
CNT30553179Triticum dicoccoidesOryza glaberrima35.5311.7186.4281forward
CNT30137220Triticum dicoccoidesLolium perenne61.849.694.33141forward
CNT30721484Triticum dicoccoidesTriticum spelta66.6720.7998.68152forward
CNT30361046Triticum dicoccoidesSorghum bicolor58.3321.3590.98133forward
CNT30619970Triticum dicoccoidesCajanus cajan21.9313.029450forward
CNT30706773Triticum dicoccoidesPrunus avium27.191096.7762forward
CNT30322744Triticum dicoccoidesAsparagus officinalis31.1421.0194.3771forward
CNT30579791Triticum dicoccoidesEchinochloa crusgalli61.411.1188.57140forward
CNT30176366Triticum dicoccoidesVigna angularis25.4412.1189.6658forward

Expression of CNT30662885

Peptides detected in this lncRNA

>peptide 1 (74 aa)
EGHAGALAGEDEDERGDELGERRLEGAHLVHLTVAPHGDPADRHFRSPPSLARSLAGEEEEETGWPAGVERDEGG

>peptide 2 (51 aa)
LKAMPEPWPAKTKMSVEMNSASAALRAPTSYTSRWLPTAILLTGIFAHLRA*

Sequence

>CNT30662885
CTGAAGGCCATGCCGGAGCCCTGGCCGGCGAAGACGAAGATGAGCGTGGAGATGAACTCGGCGAGCGCCGCCTTGAGGGCGCCCACCTCGTACACCTCAC
GGTGGCTCCCCACGGCGATCCTGCTGACCGGCATTTTCGCTCACCTCCGAGCCTAGCTCGCTCGCTCGCTGGAGAAGAAGAAGAAGAGACTGGCTGGCCG
GCCGGAGTGGAGAGAGATGAGGGAGGCG