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Detailed information on CNT301194


BLAST search results

BLAST vs Swiss-Prot:
sp|O64964|TIP11_MAIZE, E-value = 1e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677458Zea maysSetaria viridis36.8742.8995.11184forward
CNT30521388Zea maysSetaria italica25.8520.4185.27129forward
CNT30641419Zea maysNymphaea colorata26.8522.7580.6134forward
CNT30513779Zea maysJuglans regia23.0525.9682.61115forward
CNT30618329Zea maysSesamum indicum25.0510.1482.4125forward
CNT30524746Zea maysPhaseolus vulgaris20.2411.1782.18101forward
CNT30628528Zea maysVigna unguiculata20.2411.3986.14101forward
CNT30296934Zea maysTriticum aestivum37.4734.7696.79187forward
CNT30223457Zea maysHordeum vulgare22.4437.5891.96112forward
CNT30392788Zea maysTriticum turgidum48.718.6695.88243forward
CNT30586176Zea maysMusa acuminata48.339.5187.55241forward
CNT3084586Zea maysVigna radiata20.247.187.13101forward
CNT30553179Zea maysOryza glaberrima22.8516.4790.35114forward
CNT30242094Zea maysAvena sativa35.0747.5594.29175forward
CNT30136463Zea maysLolium perenne52.9136.0289.77264forward
CNT30229576Zea maysAnanas comosus26.0518.2688.46130forward
CNT3066802Zea maysLeersia perrieri21.0444.387.62105forward
CNT30623609Zea maysDaucus carota23.4520.8282.91117forward
CNT30365926Zea maysSorghum bicolor21.4415.9985.05107forward
CNT30620034Zea maysCajanus cajan36.4717.3280.22182forward
CNT30369235Zea maysOryza glumipatula37.2716.4985.48186forward
CNT3057351Zea maysAmborella trichopoda52.9131.0282.2264forward
CNT30101968Zea maysOryza rufipogon37.8824.8781.48189forward
CNT30575580Zea maysOryza barthii15.2322.6996.0576forward
CNT30579791Zea maysEchinochloa crusgalli53.1121.0393.58265forward

Expression of CNT301194

Peptides detected in this lncRNA

>peptide 1 (50 aa)
YDACTCTRETKRRRAGRERWMLAALRCAPLGRSASAFSSRWRGAARGCGR*

>peptide 2 (74 aa)
MDAPSKAPPTRMLAPTMKPMAMGAMVPRLPFFGSSRSPAPAPPTPTRPSARRCPWPARPSRSGAGSTPRWTPAAA

Sequence

>CNT301194
CTACGATGCATGCACGTGCACGAGAGAAACTAAACGGCGGCGAGCGGGGAGAGAGCGCTGGATGCTAGCTGCGCTGCGCTGCGCACCCCTGGGTCGGTCG
GCTTCGGCTTTTAGTAGTCGGTGGAGGGGAGCTGCTCGTGGGTGTGGGAGATGAAGAGCAGCTCGTAGATGACGCCGGCGAGGCCGCCGCCGATGAGGGG
GCCGACCCAGTACACCCACTGGTAGCCCCACTCCCAGCTGACGAGGGCGGGGCCGAAGGACACGGCGGGGTTCATGGACGCGCCGTCGAAGGCGCCGCCC
ACCAGGATGTTGGCCCCCACGATGAAGCCGATGGCAATGGGGGCGATGGTGCCCAGGCTGCCCTTCTTCGGGTCATCACGATCTCCAGCACCAGCGCCTC
CCACACCGACACGCCCGTCAGCCCGAAGGTGCCCGTGGCCTGCCCGCCCGTCGAGAAGCGGAGCAGGAAGCACGCCACGGTGGACCCCAGCAGCTGCGC