Detailed information on CNT30513779


BLAST search results

BLAST vs Swiss-Prot:
sp|P50156|TIP11_ORYSJ, E-value = 5e-61

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30618329Juglans regiaSesamum indicum59.3721.3379.09263forward
CNT30727223Juglans regiaCorchorus capsularis55.317.4679.18245forward
CNT30524746Juglans regiaPhaseolus vulgaris26.1912.8385.34116forward
CNT30568703Juglans regiaActinidia chinensis27.777.4282.93123forward
CNT301194Juglans regiaZea mays25.9623.0582.61115forward
CNT3031788Juglans regiaTheobroma cacao44.0227.2380.51195forward
CNT30579294Juglans regiaEchinochloa crusgalli31.3819.3980.58139forward
CNT30113848Juglans regiaFicus carica48.7627.9880.56216forward
CNT3050792Juglans regiaCucumis sativus54.424.1579.25241forward

Expression of CNT30513779

Peptides detected in this lncRNA

>peptide 1 (45 aa)
PTLRRSTYSKKSRAPVYLIPKMMRHRLFLCSISSLWGAAARECGL*

>peptide 2 (33 aa)
PNSKTKYVQQEKPRPCLFDTQNDETPFVSLFDQ*

Sequence

>CNT30513779
CCCAACTCTAAGACGAAGTACGTACAGCAAGAAAAGCCGCGCCCCTGTTTATTTGATACCCAAAATGATGAGACACCGTTTGTTTCTTTGTTCGATCAGT
AGTCTGTGGGGGGCAGCTGCTCGTGAGTGTGGCTTATGAATAACAACTCGTACACTATTCCGGCGATCCCACCGCCAATTAGAGGCCCTGCCCAGTAGAC
CCAGTGGTTCTCCCAGGACCAGCTCACCAGGGCGGGCCCAAACGACACGGCCGGGTTCATTGAAGCTCCGTCGAACGCACCGCCTGCCAGAATATTAGCT
CCCACGATGAAACCGATTGCTATGGGGGCGATGATTCCCAAACTACCTTTCTTTGGATCAATAGCGGTGGCGTAGACTGTGTAAACTAAACCAAACGTCA
TTACGATCTCGAAGATGAAGGCGCAAGCAACGGTGGATCCGAG