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Detailed information on CNT30618329


BLAST search results

BLAST vs Swiss-Prot:
sp|O82598|TIP13_ARATH, E-value = 2e-51

BLAST vs NONCODE:
NONGMAT001209, E-value = 3e-16

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673906Sesamum indicumSetaria viridis11.8423.1482.19146forward
CNT30521388Sesamum indicumSetaria italica11.6822.7881.94144forward
CNT30513779Sesamum indicumJuglans regia21.3359.3779.09263forward
CNT30524746Sesamum indicumPhaseolus vulgaris24.0932.8578.11297forward
CNT30708635Sesamum indicumGlycine max20.0343.4179.35247forward
CNT30223457Sesamum indicumHordeum vulgare10.6243.9686.26131forward
CNT30397893Sesamum indicumTriticum turgidum10.3820.0982.03128forward
CNT30589165Sesamum indicumMusa acuminata10.8729.2681.34134forward
CNT30542059Sesamum indicumBrassica napus13.4620.883.13166forward
CNT30553179Sesamum indicumOryza glaberrima11.8421.182.88146forward
CNT30146734Sesamum indicumMedicago truncatula12.9825.8983.75160forward
CNT30443838Sesamum indicumAegilops tauschii8.4321.5883.65104forward
CNT30256642Sesamum indicumAvena sativa11.627.7782.52143forward
CNT30310654Sesamum indicumCamelina sativa18.6558.5279.13230forward
CNT30260230Sesamum indicumBrassica rapa5.624.2185.5169forward
CNT30598709Sesamum indicumFraxinus excelsior11.655.2181.12143forward
CNT30136463Sesamum indicumLolium perenne12.921.6985.53159forward
CNT301194Sesamum indicumZea mays10.1425.0582.4125forward
CNT30229576Sesamum indicumAnanas comosus14.0324.381.5173forward
CNT3066802Sesamum indicumLeersia perrieri11.8461.687.67146forward
CNT30623609Sesamum indicumDaucus carota19.7143.2485.19243forward
CNT30596416Sesamum indicumOryza meridionalis8.2722.4782.35102forward
CNT30570838Sesamum indicumVitis vinifera15.4145.1380190forward
CNT30706772Sesamum indicumPrunus avium6.2421.9484.4277forward
CNT3057351Sesamum indicumAmborella trichopoda1521.7481.08185forward
CNT30334322Sesamum indicumCynara cardunculus13.7936.6481.76170forward

Expression of CNT30618329

Peptides detected in this lncRNA

>peptide 1 (63 aa)
MPEPDPAKTKTRVLINSATAAFTAPGCRNSSVLPMATRRRGTLKYSLGPGMVGESRTSLWGPK*

>peptide 2 (35 aa)
MGWYLYLKFVHVMWELVKPVASGDGILTVRFIGKL*

>peptide 3 (64 aa)
MMYRIPRKRVMFPPTNNPNVTAGFTWPPEMLAAIATATNRPKAWATAATMRPSGELGAFPVILL*

Sequence

>CNT30618329
GCCGTGCACTTAAACGTCAATTATCTTTTAGGTACAGAACATCGTAATTAACAAAAAGCACAAAGGCATAATACAAAATACATAAAAGCAAAGAGAACCA
TAGAAGCTTCACTTCAATTTCTCTGATCAGTAATCACTTCCGGGCAGTGCCTCGTGGGAGTGGCTGATGAAGAACACTTCATAGACAACGCCGGCGAGCG
CACCTCCGATAAGAGGCCCCGCCCAGTAGACCCAGTGGTGGGTCCAGGTGAAGCTCACCAAAGCAGGGCCGAATGACACTGCCGGGTTCATTGAAGCTCC
GGTGAAGGCGCCGCCGGCGAGAATGTTGGCTCCGACGATAAAACCAATAGCAATGGGTGCGATGGTGCCCAGGTCACCCTTCTTCGGGTCGACGGCGGTG
GCGTAGACCGTGTAAACGAGGCCGAAAGTCATCACGATCTCGAACACGAAGGCAAGCGACGACGGAGCCAAGCAGCTGAGCGATGATGTACAGAATACCA
CGGAAGAGAGTGATGTTTCCACCAACGAACAACCCAAATGTGACGGCCGGGTTCACGTGGCCGCCGGAGATGTTAGCAGCGATAGCAACCGCCACGAACA
GGCCGAAAGCATGGGCAACCGCCGCCACTATGAGGCCCTCCGGTGAGTTGGGAGCATTCCCTGTAATCTTGTTGTAGGCCATGCCGGAACCAGACCCGGC
GAAGACGAAGACCAGGGTACTGATAAACTCAGCCACCGCCGCCTTCACGGCGCCGGGCTGCCGGAACTCCTCGGTGTTGCCGATGGCGACGCGGCGGAGG
GGGACGTTGAAGTACTCGTTGGGGCCCGGCATGGTTGGAGAATCAAGAACGTCACTGTGGGGACCTAAATGACAATTCCAACTTTTCTGAGGGCTGGTGA
GTGTAATTAGAAAGTGTGAAAAGTGAGTGTATGGGGTGGTATTTATATTTGAAATTTGTGCATGTTATGTGGGAACTGGTGAAGCCGGTAGCCAGTGGGG
ATGGGATATTAACAGTTAGGTTCATAGGAAAATTGTGAGGGGAGTATATTATGCGGTGGAAGGGGCCAGCAATAGTATTCCTACAGCTCATCAGTCAACT
GACGTACTGAAAAGTGTATGTTTAGGATACGGCCACGTCACTTGGCCTGTGAGTACGACAGGATGGAGCGGTGACCTTTTTAGGTCGGCCGGCAAACGCA
ATCAATCATGCATGGAGTTCTCTAGACCTCGAG