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Detailed information on CNT30429132


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SJL8|METK3_ARATH, E-value = 0.0

BLAST vs NONCODE:
NONPOPT000587, E-value = 2e-48

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673492Papaver somniferumSetaria viridis36.5159.4579.79579forward
CNT30639623Papaver somniferumNymphaea colorata15.747.7983.94249forward
CNT30374620Papaver somniferumArabidopsis thaliana19.4835.6885.11309forward
CNT30266655Papaver somniferumChenopodium quinoa27.5538.8881.92437forward
CNT3021108Papaver somniferumCitrullus lanatus24.912481.52395forward
CNT30381460Papaver somniferumManihot esculenta28.549.1881.86452forward
CNT30402638Papaver somniferumBeta vulgaris37.3346.2182.26592forward
CNT30628634Papaver somniferumVigna unguiculata41.892.0878.88663forward
CNT30712013Papaver somniferumGlycine max23.5883.6780.21374forward
CNT30181754Papaver somniferumSecale cereale13.3733.783.02212forward
CNT30292894Papaver somniferumTriticum aestivum15.4542.7682.45245forward
CNT30508545Papaver somniferumSolanum lycopersicum7.528.7486.55119forward
CNT30144304Papaver somniferumMedicago truncatula27.9368.980.36443forward
CNT30310308Papaver somniferumCamelina sativa9.0261.987.41143forward
CNT30471855Papaver somniferumSaccharum spontaneum27.5547.580.32437forward
CNT30686785Papaver somniferumTriticum urartu19.831.0981.21314forward
CNT30368076Papaver somniferumSorghum bicolor25.2836.8281.55401forward
CNT30597062Papaver somniferumOryza meridionalis22.3832.2782.25355forward
CNT30358838Papaver somniferumLactuca sativa15.4535.8281.22245forward
CNT3022562Papaver somniferumPopulus trichocarpa35.8836.3880.67569forward
CNT3035650Papaver somniferumCucumis melo31.436.9480.32498forward
CNT30101810Papaver somniferumOryza rufipogon26.2316.4181.97416forward
CNT30116702Papaver somniferumOryza nivara15.5123.9582.93246forward
CNT30174554Papaver somniferumVigna angularis30.5867.5580485forward
CNT30113329Papaver somniferumFicus carica17.5325.8178.78278forward
CNT30725315Papaver somniferumLupinus angustifolius24.5338.6782.01389forward

Expression of CNT30429132

Peptides detected in this lncRNA

>peptide 1 (66 aa)
ILLSGVKQLKLHIQFMNNTKYIETPNQTSLYGYTNKSHADNSKEEITKNKKTETHINIGKLRQLQC*

>peptide 2 (73 aa)
MFLQVLGNLLVCDGFVVLGRDKNGVHPDRDHSSIVILVLNRHLGLSIGSQPCTCSILSHLSELGSELGGEDVS*

>peptide 3 (87 aa)
MVLSSRYFAGITGLITCSFKSLAISSFVTVSSCWVEIRTVCTLIGIIAPLSFLYSTVTWVFPSGLNHAHVPFFLTSVSLAPSLVART*

>peptide 4 (37 aa)
MTMFVLVQVSHATLLSGSCSKQASRMASETWSQSLSG*

>peptide 5 (30 aa)
MGTPTTVGIDNDLPSSESCISMRSTNHKTT*

>peptide 6 (30 aa)
MQPCSRDLALNKHQGWHLRLGRRACLGDLH*

>peptide 7 (38 aa)
MSGLCCSMLTRTLHLSQSSPTSADTKPISLHVSLTIFS*

Sequence

>CNT30429132
GATACTGCTCTCAGGAGTGAAGCAATTAAAATTGCATATCCAGTTCATGAATAACACCAAATATATTGAAACCCCAAATCAAACAAGTTTGTATGGGTAC
ACAAATAAATCTCACGCCGATAACTCTAAGGAAGAAATTACTAAAAACAAGAAAACAGAAACACACATAAATATCGGAAAACTGAGACAACTTCAATGCT
AGGCACCTTATAATCCGCTACTTCTACCCTCAACTTGAACTTCAAAGGTGCTCTAGCTACAGTCTCTCGGCTTTCTAATGGGAGCCTTGAAAAAATATAT
GGTTCATGACCATAATACAGATTACAGATAAATTTTAGACGCGGCTATTACCTTAGCATGATAAAACAAAAGTCAAACCAAGCCACCCTTTGCGAAGTAG
TAAGGCTGCGACTAGAAACTTAGGCCTTAAGGGGCTTGACAATTTCCCATGTGAAATCGGGATCATCACGGCCAAAATGCCCATAAGCTGCAGTCTTTTG
GAACCTGTAGTTTCCTCCTCTCTTGAGGTCAAGGTTGATTGACATCATTCCTGGCCTGAAGTCGAAGTTCTCCTTTACCAAAGCTAGGATATCCTTGTCA
GGGATAGTTCCTGTTTTGTAAGAGTCCACGAAGATGGATAGTGGCTCAGGCACACCGATAGCATATGACACTTGAACAATGCAACGTCTGGCTAGCCCTG
CTGCGACTATACTCTTGGCAGCCTGCCTGACAATGTAAGCACCACTTCTGTCCACCTTTGTTGGATCCTTGCCGGAGAATGCACCTCCACCATGGGCACC
CCAACCACCGTAGGTATCGATAATGATCTTCCTTCCAGTGAGTCCTGCATCTCCATGAGGTCCACCAATCACAAAACGACCTGATGGGTTCAAGTGAAAG
ATGGTGTTATCGTCAAGGTACTTTGCTGGGATAACAGGTTTGATAACATGTTCCTTCAAGTCCTTGGCAATCTCCTCGTTTGTGACGGTTTCGTCGTGCT
GGGTAGAGATAAGAACGGTGTGCACCCTGATAGGGATCATAGCTCCATTGTCATTCTTGTACTCAACCGTCACTTGGGTCTTTCCATCGGGTCTCAACCA
TGCACATGTTCCATTCTTTCTCACCTCAGTGAGCTTGGCTCCGAGCTTGGTGGCGAGGACGTGAGTTAGGGGCATCAATTCAGGAGTCTCGTCAGTGGCA
TATCCGAACATGTGACCTTGATCACCAGCTCCAATCTCCTCAGGCTTCTTTGTAAGGTGACCGTGGACACCCTGAGCAATGTCGGGACTTTGTTGCTCGA
TGTTAACAAGGACATTGCATCTGTCACAATCAAGTCCGACATCAGCTGACACGAAACCGATTTCTCTGCATGTGTCTCTTACGATTTTCTCGTAATCGAC
CTTAGCCTTGGTGGTGATTTCACCAAAGACCATGACCATGTTTGTCTTGGTACAGGTCTCACATGCAACCTTGCTCTCGGGATCTTGCTCTAAACAAGCA
TCAAGGATGGCATCTGAGACTTGGTCGCAGAGCTTGTCTGGGTGACCTTCATTGACAGATTCGGATGTGAATAGGAAGGTATCCAT