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Detailed information on CNT30144304


BLAST search results

BLAST vs Swiss-Prot:
sp|A4ULF8|METK_MEDSF, E-value = 1e-107

BLAST vs NONCODE:
NONPOPT000587, E-value = 2e-58

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30641080Medicago truncatulaNymphaea colorata42.9230.8482.61276forward
CNT30515028Medicago truncatulaJuglans regia42.7732.3982.91275forward
CNT30373104Medicago truncatulaArabidopsis thaliana57.2343.8686.14368forward
CNT3021108Medicago truncatulaCitrullus lanatus61.432485.06395forward
CNT30729630Medicago truncatulaCorchorus capsularis37.4829.4382.16241forward
CNT30402638Medicago truncatulaBeta vulgaris62.6731.4687.59403forward
CNT30712018Medicago truncatulaGlycine max37.3345.285.83240forward
CNT3047443Medicago truncatulaPrunus dulcis42.7723.0585.09275forward
CNT30158121Medicago truncatulaPistacia vera25.9726.7285.63167forward
CNT30188757Medicago truncatulaSecale cereale35.351.2484.58227forward
CNT30292894Medicago truncatulaTriticum aestivum35.1539.4484.96226forward
CNT30225924Medicago truncatulaHordeum vulgare28.332.3385.71182forward
CNT30389985Medicago truncatulaTriticum turgidum48.6830.7883.39313forward
CNT30508545Medicago truncatulaSolanum lycopersicum18.5128.7489.08119forward
CNT30441436Medicago truncatulaAegilops tauschii36.746.5583.9236forward
CNT30662024Medicago truncatulaTriticum dicoccoides18.0422.8381.9116forward
CNT3066706Medicago truncatulaLeersia perrieri19.637.0685.71126forward
CNT30686785Medicago truncatulaTriticum urartu44.4828.3283.92286forward
CNT30477100Medicago truncatulaArabidopsis halleri26.2842.7883.43169forward
CNT30368062Medicago truncatulaSorghum bicolor33.2819.4783.18214forward
CNT30358838Medicago truncatulaLactuca sativa41.8439.3384.01269forward
CNT30429132Medicago truncatulaPapaver somniferum68.927.9380.36443forward
CNT3055164Medicago truncatulaAmborella trichopoda46.0325.7481.08296forward
CNT3035650Medicago truncatulaCucumis melo66.5631.7584.58428forward
CNT30331991Medicago truncatulaDioscorea rotundata20.6828.1284.21133forward
CNT30148817Medicago truncatulaBrachypodium distachyon24.1113.4189.03155forward
CNT30174424Medicago truncatulaVigna angularis40.4431.9886.15260forward
CNT30113329Medicago truncatulaFicus carica44.0126.2884.45283forward
CNT30725315Medicago truncatulaLupinus angustifolius66.8742.7486.98430forward

Expression of CNT30144304

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAMNTLSNIRTLLFNVDKDFAVVSIKTNII*

>peptide 2 (31 aa)
MLTRTLQLSASRPTSSETKPMFLHVLRTIFS*

>peptide 3 (39 aa)
QQYSLQLVSQCKLHSCRLLLDLYRRKHHHRVHPNHHKYR*

>peptide 4 (97 aa)
MTKRPEGFKWKMVFSSRYFSGITGLITCSFKSAAISSLVTVSSCCVEIRTVWTRIGTMAPLSLKYSIVTWVFPSGLNQGHVPFLRTSVSLAPNLVFL*

>peptide 5 (41 aa)
MDTDRNHGALVIEILNSDLGLSIRSQPRACSVLANFSELSS*

>peptide 6 (45 aa)
NNTLCSLSHNVSSTPVDFCWIFTGESTTTVCTPTTISIDDDLAAG*

Sequence

>CNT30144304
CAACAATACTCTTTGCAGCTTGTCTCACAATGTAAGCTCCACTCCTGTCGACTTTTGTTGGATCTTTACCGGAGAAAGCACCACCACCGTGTGCACCCCA
ACCACCATAAGTATCGATGATGATCTTGCGGCCGGTTAGACCAGCGTCACCGTGAGGACCACCGATGACGAAACGGCCTGAAGGGTTCAAGTGGAAGATG
GTTTTCTCATCAAGGTACTTCTCTGGGATCACGGGCTTGATCACATGTTCCTTCAAATCAGCTGCAATTTCGTCATTGGTGACAGTTTCATCGTGCTGTG
TTGAGATAAGGACAGTATGGACACGGATCGGAACCATGGCGCCCTTGTCATTGAAATACTCAATAGTGACTTGGGTCTTTCCATCAGGTCTCAACCAAGG
GCATGTTCCGTTCTTGCGAACTTCAGTGAGCTTAGCTCCTAACTTGGTCTTTTTGTAAGATGGCCATGAACACCTTGAGCAATATCAGGACTCTGTTGTT
CAATGTTGACAAGGACTTTGCAGTTGTCAGCATCAAGACCAACATCATCTGAAACAAAACCTATGTTCCTGCATGTTTTACGGACAATCTTTTCGTAGTC
AACATTTGCTTTTGTTGTGATCTCACCAAAGACCATAACCATG