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Detailed information on CNT30381460


BLAST search results

BLAST vs Swiss-Prot:
sp|A9P822|METK1_POPTR, E-value = 1e-143

BLAST vs NONCODE:
NONPOPT000587, E-value = 1e-107

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Manihot esculentaSetaria viridis51.1459.1985.11470forward
CNT30520816Manihot esculentaSetaria italica54.1957.6484.94498forward
CNT30698521Manihot esculentaQuercus lobata29.1647.7785.45268forward
CNT30373104Manihot esculentaArabidopsis thaliana54.6259.8380.68502forward
CNT30618114Manihot esculentaSesamum indicum24.595082.74226forward
CNT3021108Manihot esculentaCitrullus lanatus43.224.1284.63397forward
CNT30729630Manihot esculentaCorchorus capsularis41.0246.0384.88377forward
CNT30402638Manihot esculentaBeta vulgaris66.1647.4685.03608forward
CNT30524850Manihot esculentaPhaseolus vulgaris36.4546.485.37335forward
CNT30628391Manihot esculentaVigna unguiculata67.1453.7983.47617forward
CNT30490001Manihot esculentaOlea europaea11.8621.9888.07109forward
CNT30712616Manihot esculentaGlycine max39.2844.485.6361forward
CNT30188757Manihot esculentaSecale cereale45.5994.5882.1419forward
CNT30294498Manihot esculentaTriticum aestivum45.0551.8182.13414forward
CNT30225924Manihot esculentaHordeum vulgare43.7471.481.34402forward
CNT30389985Manihot esculentaTriticum turgidum56.4751.0383.24519forward
CNT30561874Manihot esculentaActinidia chinensis43.7445.5886.82402forward
CNT30172560Manihot esculentaTrifolium pratense33.344.9384.31306forward
CNT30146819Manihot esculentaMedicago truncatula43.5353.2683.75400forward
CNT30437887Manihot esculentaAegilops tauschii43.8557.5782.38403forward
CNT30471290Manihot esculentaSaccharum spontaneum51.2552.4585.35471forward
CNT30608385Manihot esculentaGossypium raimondii38.9665.0987.43358forward
CNT30686785Manihot esculentaTriticum urartu53.3248.5181.84490forward
CNT30349162Manihot esculentaEragrostis tef49.5149.9585.05455forward
CNT30368062Manihot esculentaSorghum bicolor40.0433.4885.33368forward
CNT30597069Manihot esculentaOryza meridionalis50.8223.3483.08467forward
CNT30429132Manihot esculentaPapaver somniferum49.1828.581.86452forward
CNT3022562Manihot esculentaPopulus trichocarpa72.2542.4689.46664forward
CNT3035650Manihot esculentaCucumis melo46.7931.983.72430forward
CNT30331991Manihot esculentaDioscorea rotundata21.8742.4984.58201forward
CNT30725315Manihot esculentaLupinus angustifolius64.258.6582.71590forward

Expression of CNT30381460

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MFLEVSGNLIICDSLIVLGGDEDSVYTDWDHCTIVIVVLDSYLSLSIRS*

>peptide 2 (63 aa)
MTKRPDGLRWKMVFSSRYFSGMTALMTCSLRSAAISSFVTVSSCWVEMRTVCTRTGTIAPLSL*

Sequence

>CNT30381460
AATCAAATTAAACAAAATTCTCCTACATTTTTATAGCACCAACACTGGTAAATGAAACGTGGTAAAAAAGAAATAAAATTGAATAGGGCATTTTATGTAT
TAGATTAGACCATTGCAGACTTTTAGATTTGTAGTGCAGCAGTAAGAAACACGCCAACTTATTCATCAACCAGCCAAAGCAAGCACCGACAGCAGGGATA
GGATAAATCACACTTAAGCCTGAGGCTTATCCCACTTGAGGGGCTTGACGACCTCCCAGGTCTAAAGTCAAAATTCTCTTTCACAATCTTGAGAATCTCC
TTGTCAGGAATCTTTCCTGTTCCATAGGTGTCCACAAAGACAGACAAAGGCTCAGGAACACCAATGGCATAGGAAACCTGCACGATACACCGGCGAGCAA
GACCATTTGCTACAATACTCTTGGCTGCCTGCCTAACAATATAAGCACCGCTCCTGTCCACCTTGGTTGGGTCCTTTCCTGAAAAGGCACCACCACCATG
GGCCCCCCAGCCACCATAGGTGTCAATAATGATCTTGCGTCCAGTTAGTCCTGCATCACCGTGAGGACCACCAATGACAAAACGACCAGATGGGTTAAGG
TGGAAGATGGTCTTCTCATCAAGGTACTTCTCAGGGATGACAGCTTTGATGACATGTTCCTTGAGGTCAGCGGCAATCTCATCATTTGTGACAGTCTCAT
CGTGCTGGGTGGAGATGAGGACAGTGTGTACACGGACTGGGACCATTGCACCATTGTCATTGTAGTACTCGACAGTTACCTGAGTCTTTCCATCAGGTCT
TAGCCATGGGCAGGTGCCATTCTTCCTAACCTCAGTAAGGCGAGCTCCAAGCTTGGTGGCCAGGACATGGCTCAATGGCATATACTCCGGCGTCTCATCA
GTGGCATAACCAAACATAT