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Detailed information on CNT30686785


BLAST search results

BLAST vs Swiss-Prot:
sp|Q4LB22|METK3_HORVU, E-value = 9e-173

BLAST vs NONCODE:
NONATHT001922, E-value = 4e-21

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672380Triticum urartuSetaria viridis48.0261.0886.39485forward
CNT30520816Triticum urartuSetaria italica49.2157.5286.12497forward
CNT30641080Triticum urartuNymphaea colorata26.5329.9485.07268forward
CNT30373104Triticum urartuArabidopsis thaliana31.2937.6684.81316forward
CNT30618114Triticum urartuSesamum indicum15.3534.2985.16155forward
CNT3021108Triticum urartuCitrullus lanatus40.224.6784.73406forward
CNT30381460Triticum urartuManihot esculenta48.5153.3281.84490forward
CNT30402638Triticum urartuBeta vulgaris44.1634.8285.2446forward
CNT30188757Triticum urartuSecale cereale27.1361.8597.08274forward
CNT30172560Triticum urartuTrifolium pratense26.7339.6582.59270forward
CNT30144304Triticum urartuMedicago truncatula28.3244.4883.92286forward
CNT30471290Triticum urartuSaccharum spontaneum48.0254.0187.01485forward
CNT30624603Triticum urartuDaucus carota30.246.2183.93305forward
CNT30349162Triticum urartuEragrostis tef34.0637.7685.76344forward
CNT30620812Triticum urartuCajanus cajan28.4223.1180.84287forward
CNT30597069Triticum urartuOryza meridionalis48.3224.3986.07488forward
CNT30429132Triticum urartuPapaver somniferum31.0919.881.21314forward
CNT3055164Triticum urartuAmborella trichopoda22.8720.0985.28231forward
CNT3022562Triticum urartuPopulus trichocarpa51.0932.9981.01516forward
CNT3035650Triticum urartuCucumis melo40.230.1284.48406forward
CNT30148817Triticum urartuBrachypodium distachyon35.8431.3190.06362forward
CNT30174424Triticum urartuVigna angularis34.5542.9382.23349forward
CNT30113329Triticum urartuFicus carica21.8820.5288.69221forward

Expression of CNT30686785

Peptides detected in this lncRNA

>peptide 1 (46 aa)
VQVDADHPGPEVKVLLHELEDLPVGDLAGAVGVDEHRQRLRHTDGV*

>peptide 2 (48 aa)
MTMLVLVTVSQASKTASETWSQSLSGWPSFTDSDVKRNVSAAIPLVLAV

>peptide 3 (73 aa)
MTKRPDGFRWKMVFSSRYFAGITGLMTCSLRSAAISSLVTVSSCWVEMRTVCTRTGTMAPSSFRRRCHSCGPR*

>peptide 4 (30 aa)
SRLMLIIPGLKSKFSFTSLRISLSGILPVP*

>peptide 5 (36 aa)
MLLEVRGNLVVGDGLVVLGGDEDGVHTNRYHGTILV*

>peptide 6 (38 aa)
MSGDCCSMLTSTLQRSASRPTSSEMKPMLRQVSRTIFS*

Sequence

>CNT30686785
AGTCCAGGTTGATGCTGATCATCCCGGGCCTGAAGTCAAAGTTCTCCTTCACGAGCTTGAGGATCTCCCTGTCGGGGATCTTGCCGGTGCCGTAGGAGTC
GACGAACACAGACAAAGGCTCAGGCACACCGATGGCGTATGAGATCTGCACAATGCAGCGGCGTGCGAGGCCGCTGGCGATGATGCTCTTGGCGGCCTGC
CTGGCAATGTAGGCGCCACTGCGGTCGACCTTGGTTGGGTCCTTGCCAGAGAAGGCACCGCCGCCGTGGGCTCCCCAGCCACCATAGGTGTCGATGATGA
TCTTGCGGCCGGTGAGACCGGCGTCACCGTGAGGGCCGCCGATGACGAAGCGGCCAGACGGGTTCAGGTGGAAGATGGTGTTCTCATCGAGGTACTTCGC
GGGGATCACCGGCTTGATGACATGCTCCTTGAGGTCCGCGGCAATCTCGTCGTTGGTGACGGTCTCGTCGTGCTGGGTGGAGATGAGGACGGTGTGCACA
CGAACAGGTACCATGGCACCATCCTCGTTTAGGCGCAGGTGCCATTCTTGCGGACCTCGGTGAGGCGAGCTCCGAGCTTGGTGGCAAGCACGTGGCTGAG
GGGCATCAGCTCAGGGGTCTCGTCGGTGGCATAGCCGAACATGATGCCCTGGTCACCGGCGCCGACCTCTTCGGGACGCTTGGTGAAGTGTCCGTGAACA
CCCTGGGCAATGTCAGGGGACTGCTGCTCGATGTTGACGAGCACCTTGCAACGGTCGGCGTCGAGACCAACATCATCAGAGATGAAGCCGATGTTGCGGC
AGGTGTCGCGCACGATCTTCTCATAGTCGACGGTGGCCTTAGTGGTGATCTCGCCCAAGACCATGACCATGTTGGTCTTGGTGACAGTCTCGCAGGCATC
CAAGACGGCGTCGGAGACCTGGTCACAGAGCTTGTCGGGATGGCCCTCATTCACAGACTCGGACGTGAAGAGGAACGTCTCGGCCGCCATTCCTTTAGTG
CTAGCGGTGC