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Detailed information on CNT30181754


BLAST search results

BLAST vs Swiss-Prot:
sp|A6XMY9|METK1_TRIMO, E-value = 1e-129

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30672441Secale cerealeSetaria viridis44.363688.17279forward
CNT30520816Secale cerealeSetaria italica44.3632.2987.81279forward
CNT30639623Secale cerealeNymphaea colorata31.9638.5886.57201forward
CNT30698521Secale cerealeQuercus lobata40.3845.2882.68254forward
CNT3021108Secale cerealeCitrullus lanatus44.216.8985.61278forward
CNT30729630Secale cerealeCorchorus capsularis43.7233.5884275forward
CNT30495282Secale cerealeOlea europaea33.5511.9882.94211forward
CNT30712013Secale cerealeGlycine max33.5547.282.94211forward
CNT3047442Secale cerealePrunus dulcis33.734.9886.32212forward
CNT30158121Secale cerealePistacia vera26.5526.7286.83167forward
CNT30294498Secale cerealeTriticum aestivum53.141.897.9334forward
CNT30389985Secale cerealeTriticum turgidum47.5429.497.99299forward
CNT30561874Secale cerealeActinidia chinensis43.2430.8484.19272forward
CNT3086110Secale cerealeVigna radiata20.6711.6384.62130forward
CNT30508545Secale cerealeSolanum lycopersicum28.4643.2483.24179forward
CNT30437887Secale cerealeAegilops tauschii47.5442.7197.66299forward
CNT30662024Secale cerealeTriticum dicoccoides40.750.3997.66256forward
CNT3082721Secale cerealeBrassica juncea28.9362.9885.71182forward
CNT30471855Secale cerealeSaccharum spontaneum44.5230.4388.21280forward
CNT30608385Secale cerealeGossypium raimondii41.3447.2785260forward
CNT30218287Secale cerealeKalanchoe fedtschenkoi33.740.8583.96212forward
CNT30650534Secale cerealeRosa chinensis52.9435.7385.29333forward
CNT30212612Secale cerealeHelianthus annuus31.9683.479.1201forward
CNT30624603Secale cerealeDaucus carota52.9450.4582.88333forward
CNT30681758Secale cerealeTriticum urartu52.6248.5397.89331forward
CNT30355133Secale cerealeLactuca sativa26.2318.8681.82165forward
CNT30429132Secale cerealePapaver somniferum33.713.3783.02212forward
CNT30570674Secale cerealeVitis vinifera46.4230.9383.56292forward
CNT3025891Secale cerealePopulus trichocarpa46.137.2383.1290forward
CNT30331991Secale cerealeDioscorea rotundata32.4343.1381.86204forward
CNT30148817Secale cerealeBrachypodium distachyon45.7924.9193.4288forward
CNT30101810Secale cerealeOryza rufipogon37.29.2387.18234forward
CNT30113343Secale cerealeFicus carica27.8249.4486.86175forward
CNT30725315Secale cerealeLupinus angustifolius46.128.8383.79290forward

Expression of CNT30181754

Peptides detected in this lncRNA

>peptide 1 (75 aa)
MAEGHELRGLISGIAKHDTLVTSANILRALGEVSMHTLSNVRRLLLYVDKHLAPVSIKANIIRDEANVAAGVTHNL

>peptide 2 (64 aa)
MTKRPDGFKWNMVFSSRYSTVTWVLPSGLSQAQVPFLRTSVRRAPSLVASTWLRGMSSGVSSVA*

>peptide 3 (36 aa)
MSGDCCSMLTSTLHRSASRPTSSEMKPMLRQVSRTIF

Sequence

>CNT30181754
GGAGTCGACGAAGACAGATAAGGGCTCAGGCACACCAATGGCATAGGAGATCTGCACAATGCAGCGGCGTGCAAGACCGCTAGCAATGATACTCTTGGCA
GCCTGCCTGGCAATGTAGGCGCCACTGCGGTCAACCTTAGTTGGGTCCTTGCCGGAGAAAGCACCACCTCCGTGTGCTCCCCAGCCACCATAGGTGTCGA
TGATGATCTTGCGACCAGTAAGACCAGCATCACCATGAGGACCCCCAATGACAAAGCGGCCTGATGGATTCAAGTGGAATATGGTCTTCTCGTCCAGGTA
TTCAACCGTGACCTGGGTTTTGCCATCAGGCCTTAGCCAGGCACAAGTGCCATTCTTGCGGACTTCAGTGAGGCGGGCACCGAGCTTGGTGGCAAGCACA
TGGCTGAGGGGCATGAGCTCAGGGGTCTCATCAGTGGCATAGCCAAACATGATACCCTGGTCACCAGCGCCAATATCCTCAGGGCGCTTGGTGAAGTGTC
CATGCACACCCTGAGCAATGTCAGGAGACTGCTGCTCTATGTTGACAAGCACCTTGCACCGGTCAGCATCAAGGCCAACATCATCAGAGATGAAGCCAAT
GTTGCGGCAGGTGTCACGCACAATCTTCT