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Detailed information on CNT30370811


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 3e-97

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678303Oryza glumipatulaSetaria viridis24.6554.7893.85195forward
CNT30522020Oryza glumipatulaSetaria italica35.7859.794.7283forward
CNT30639185Oryza glumipatulaNymphaea colorata39.1972.683.87310forward
CNT30515273Oryza glumipatulaJuglans regia35.1543.3780.22278forward
CNT30525887Oryza glumipatulaPhaseolus vulgaris11.7624.8786.0293forward
CNT30630495Oryza glumipatulaVigna unguiculata37.852.7381.61299forward
CNT30710333Oryza glumipatulaGlycine max40.0836.4482.65317forward
CNT30395090Oryza glumipatulaTriticum turgidum55.6340.9392.27440forward
CNT3089114Oryza glumipatulaVigna radiata34.6428.4881.75274forward
CNT30440464Oryza glumipatulaAegilops tauschii55.6353.0192.73440forward
CNT30246994Oryza glumipatulaAvena sativa53.8651.0292.96426forward
CNT30665756Oryza glumipatulaTriticum dicoccoides46.1451.4192.88365forward
CNT30446699Oryza glumipatulaSaccharum spontaneum32.1128.3292.52254forward
CNT30971Oryza glumipatulaZea mays37.4251.9392.23296forward
CNT30651308Oryza glumipatulaRosa chinensis21.8730.0380.35173forward
CNT30344027Oryza glumipatulaEragrostis tef50.749.6393.52401forward
CNT30361538Oryza glumipatulaSorghum bicolor33.8855.2692.16268forward
CNT30619829Oryza glumipatulaCajanus cajan40.0832.1584.23317forward
CNT30356274Oryza glumipatulaLactuca sativa40.248.7778.93318forward
CNT3035037Oryza glumipatulaCucumis melo12.0131.6786.3295forward
CNT30148662Oryza glumipatulaBrachypodium distachyon40.241.390.57318forward
CNT30579362Oryza glumipatulaEchinochloa crusgalli54.6149.5493.52432forward
CNT30117312Oryza glumipatulaOryza nivara93.5593.9198.78740forward
CNT30174623Oryza glumipatulaVigna angularis32.7430.481.08259forward
CNT30113105Oryza glumipatulaFicus carica39.9539.587.34316forward
CNT3049718Oryza glumipatulaCucumis sativus24.436.9780.83193forward

Expression of CNT30370811

Peptides detected in this lncRNA

>peptide 1 (35 aa)
INTLMNTHQNSPNIYYNIIRRDYIPPSIDYTIINN*

>peptide 2 (37 aa)
MSKTFLPVNLTSMGLTFLPMLRKFWPTPCLPALTFSG*

>peptide 3 (32 aa)
MAMVVGGGERRVPCGGFDSSGVVWRREISEME*

Sequence

>CNT30370811
AATTAACACGTTAATGAACACGCATCAAAATTCACCAAACATATACTACAATATTATAAGAAGAGATTATATCCCACCATCGATCGATTACACCATCATC
AATAACTGAAGAGCAGCCTGACAGATGATTAAAATTACATGTCCATCCACCCAAAACACAAGTAATTAATAGGTCGATTATGAGAGAAGAAGAAGAAGAA
GTCTAGATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGGCCGACGCCCTGCCTGCCGG
CGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGGAGGTACTGCACCTCGCCATTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTGGA
GCGGAGCCTGGTGCCCAGGGCCAGGCACTGCTCCTTCCTGGCCAGCTTCAGCAGGTTGGGGCCCTCGCGCATGATGGCGGCGCCGCCCGTGGGCATCTCG
AACACCTGCTCCTTGGGCGACGTCCATGTGATGACGTAGAACTCCTCCACCTGCGCCTTCCGGAGGAGTCCCCCCGTGCTCCCGCCGAAGATCGGGGACG
GCGTGTTGGGGTCCAGCTGCGGCGGCACGAACCCCGCGGGGGCTTGCGTGGCCATGGCCATGGTGGTCGGAGGAGGAGAGAGGAGGGTACCGTGTGGCGG
ATTCGATTCGAGTGGTGTGGTGTGGAGGAGAGAGATATCGGAGATGGAGTAGAGAAAAGCCCAAGAAGAAGAGAGGGGAAATGGGTGAGGA