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Detailed information on CNT30525887


BLAST search results

BLAST vs Swiss-Prot:
sp|P84563|PSAD_POPEU, E-value = 2e-13

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695265Phaseolus vulgarisOryza sativa24.8713.4286.0293forward
CNT30677834Phaseolus vulgarisSetaria viridis22.9918.1487.2186forward
CNT30522550Phaseolus vulgarisSetaria italica22.9918.0787.2186forward
CNT30639185Phaseolus vulgarisNymphaea colorata29.4125.7685.45110forward
CNT30515273Phaseolus vulgarisJuglans regia28.3416.5483.02106forward
CNT30377112Phaseolus vulgarisArabidopsis thaliana39.8423.4379.87149forward
CNT30380146Phaseolus vulgarisManihot esculenta20.596.0185.7177forward
CNT30630495Phaseolus vulgarisVigna unguiculata102.9467.988.83385forward
CNT30197643Phaseolus vulgarisPisum sativum22.1937.3984.3483forward
CNT30505774Phaseolus vulgarisNicotiana attenuata29.1422.884.4109forward
CNT30710333Phaseolus vulgarisGlycine max36.6315.7586.13137forward
CNT3089114Phaseolus vulgarisVigna radiata61.2323.890.83229forward
CNT30554655Phaseolus vulgarisOryza glaberrima24.8710.6386.0293forward
CNT30171560Phaseolus vulgarisTrifolium pratense36.631780.29137forward
CNT30145708Phaseolus vulgarisMedicago truncatula33.4216.2383.2125forward
CNT30446699Phaseolus vulgarisSaccharum spontaneum23.89.9285.3989forward
CNT302080Phaseolus vulgarisZea mays23.820.7985.3989forward
CNT30651308Phaseolus vulgarisRosa chinensis31.0220.1485.34116forward
CNT30344027Phaseolus vulgarisEragrostis tef21.399.986.2580forward
CNT30361778Phaseolus vulgarisSorghum bicolor23.812.1686.5289forward
CNT30619829Phaseolus vulgarisCajanus cajan39.0414.8193.15146forward
CNT30596768Phaseolus vulgarisOryza meridionalis24.8711.8886.0293forward
CNT30370811Phaseolus vulgarisOryza glumipatula24.8711.7686.0293forward
CNT30428061Phaseolus vulgarisPapaver somniferum32.628.5183.61122forward
CNT30577354Phaseolus vulgarisOryza barthii24.8711.3186.0293forward
CNT30579578Phaseolus vulgarisEchinochloa crusgalli23.810.8184.2789forward
CNT30117448Phaseolus vulgarisOryza nivara24.8713.7886.0293forward
CNT30174623Phaseolus vulgarisVigna angularis36.3615.9691.91136forward
CNT30113105Phaseolus vulgarisFicus carica27.0112.6283.17101forward

Expression of CNT30525887

Peptides detected in this lncRNA

>peptide 1 (88 aa)
FFRRLPCDHIELLHLGLPQKPTSAASEDRGRRVWVQFRWGEPNGCLFCGCLCGFIGSSSDCLGQLEGLRGGKGEGWGEEGGLGCHGHG*

Sequence

>CNT30525887
TGTTCTTTCGGAGACTCCCATGTGATCACATAGAACTCCTCCACCTGGGCCTTCCGCAAAAGCCCACCAGTGCTGCCTCCGAAGATCGGGGAAGGCGTGT
TTGGGTCCAGTTCCGGTGGGGTGAACCCAACGGGTGCCTCTTTTGTGGCTGCCTCTGCGGTTTCATCGGCAGCAGCTCTGATTGTCTTGGACAACTTGAG
GGGCTTCGGGGAGGTAAAGGAGAAGGGTGGGGTGAAGAGGGAGGCTTGGGTTGCCATGGCCATGGGTAAGAACAGCAGAAGGTTTGAGAAGTGTTTGGTT
GTTGTGTTGTGAGAGATCAATGAGAAACAAAAGAGAGTAAAGAAGTATAGGGTGAAGAAGATCTTGGATGGGTG