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Detailed information on CNT30619829


BLAST search results

BLAST vs Swiss-Prot:
sp|P12353|PSAD_SPIOL, E-value = 3e-107

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Cajanus cajanOryza sativa32.1541.3884.23317forward
CNT30678303Cajanus cajanSetaria viridis16.7346.3585.45165forward
CNT30522550Cajanus cajanSetaria italica27.7957.5684.67274forward
CNT30639185Cajanus cajanNymphaea colorata31.4472.683.87310forward
CNT30315306Cajanus cajanCorylus avellana12.8820.9681.89127forward
CNT30515273Cajanus cajanJuglans regia39.666184.4391forward
CNT30376473Cajanus cajanArabidopsis thaliana25.3535.6180250forward
CNT30269143Cajanus cajanChenopodium quinoa30.9339.2580305forward
CNT30380146Cajanus cajanManihot esculenta39.9630.7682.99394forward
CNT30403648Cajanus cajanBeta vulgaris24.1421.4684.87238forward
CNT30525887Cajanus cajanPhaseolus vulgaris11.1629.4196.36110forward
CNT30630495Cajanus cajanVigna unguiculata30.3252.7389.97299forward
CNT30505774Cajanus cajanNicotiana attenuata23.2347.9181.66229forward
CNT30710333Cajanus cajanGlycine max41.9947.5989.61414forward
CNT30298930Cajanus cajanTriticum aestivum19.6823.3582.47194forward
CNT30395090Cajanus cajanTriticum turgidum32.1529.4981.7317forward
CNT3089114Cajanus cajanVigna radiata26.9827.6591.35266forward
CNT30554655Cajanus cajanOryza glaberrima32.1536.2384.23317forward
CNT30171560Cajanus cajanTrifolium pratense20.8925.5681.07206forward
CNT30145740Cajanus cajanMedicago truncatula40.3749.4482.16398forward
CNT30440464Cajanus cajanAegilops tauschii32.1538.1981.39317forward
CNT30246994Cajanus cajanAvena sativa30.1235.5783.5297forward
CNT30665756Cajanus cajanTriticum dicoccoides26.1736.3481.4258forward
CNT3061459Cajanus cajanArabidopsis lyrata24.3440.9678.75240forward
CNT30446699Cajanus cajanSaccharum spontaneum23.8326.283.83235forward
CNT30971Cajanus cajanZea mays26.8846.4983.4265forward
CNT30228866Cajanus cajanAnanas comosus22.2125.0679.91219forward
CNT30651207Cajanus cajanRosa chinensis23.0233.5385.46227forward
CNT30344027Cajanus cajanEragrostis tef31.0337.8782.68306forward
CNT30361538Cajanus cajanSorghum bicolor25.1551.1384.68248forward
CNT30596794Cajanus cajanOryza meridionalis19.7829.4184.1195forward
CNT30356274Cajanus cajanLactuca sativa34.9952.9183.19345forward
CNT30370811Cajanus cajanOryza glumipatula32.1540.0884.23317forward
CNT30410573Cajanus cajanPapaver somniferum41.8945.9481.11413forward
CNT30570681Cajanus cajanVitis vinifera25.3518.2988.4250forward
CNT3035037Cajanus cajanCucumis melo9.9432.6782.6598forward
CNT30148662Cajanus cajanBrachypodium distachyon26.1733.5180.62258forward
CNT30577354Cajanus cajanOryza barthii32.1538.5684.23317forward
CNT30579362Cajanus cajanEchinochloa crusgalli32.1536.3583.28317forward
CNT30499040Cajanus cajanDigitaria exilis18.4626.7682.97182forward
CNT30117312Cajanus cajanOryza nivara32.1540.2384.23317forward
CNT30174623Cajanus cajanVigna angularis28.332.7591.04279forward
CNT30113105Cajanus cajanFicus carica41.8951.6284.26413forward
CNT30725909Cajanus cajanLupinus angustifolius20.9936.8389.37207forward

Expression of CNT30619829

Peptides detected in this lncRNA

>peptide 1 (57 aa)
MARRLGLPWPWNMLCYKVQKCHRSIRNKRKESKVGCGRCVFVDVDMDKVICLGPIII*

Sequence

>CNT30619829
TCTCAGTTGATCAGCGATTTGTGAGTCTTAGGCAAGCAAGGTTTGATGAATATATGAGGAAATAAAGATGGTGTAGACAGAATAATGATATAATAGGAGA
AAGAAGAGTGTAAACAGAAGGGTTACAGAGTTGAGCATTTGTGACATAAAATGGAGAATAGGTAGATGAGAAACGGGATGTAATGATAGAGTTGTGATTA
GAGTTGCTCACAAATCATAGGGTTGCTTGCCAGTGAACTTGACCTCAATAGGGTTAACATTCTTACCAATGGACCTGAAGTTTTGACCAACCCCTTGGCG
ACCAGGGTTGACCTTCTCAGGGTAGACACCATCCTTGGGGTGCAAGTATTGGACTTCTCCGTTGGGGAAGACCCTGTAGAACTGGTACTTGATCTTGTAC
TTGGACCTGAGCCTGGTTCCAAGAGCCAAGCACTGCTCCTTCCTCGCCAACTTGAGGAGGTTAGGGCCCTCCCTCATGATGGCAGCTCCCCCAGTGGGCA
TTTCGAAGATCTGTTCCTTCGGAGACTCCCATGTGATCACATAGAACTCCTCCACCTGGGCCTTCCGCAAAAGCCCACCAGTGCTGCCGCCGAAGATCGG
GGACGGGGTGTTTGGGTCCAGCTCTGGGGGGGTGAACCCCACTGGAGCCTCTTTTGTTGGGGCCTCTGTCACCTCATCGGAAGCTGCTGCTCTCATTGTT
TTCTTCAACTTGAGGGGCCTGCAGGAGAAGCTGGGGGGCTGTTTCCATGGCACGGAGGCTTGGGTTGCCATGGCCATGGAATATGCTATGCTACAAGGTT
CAGAAGTGTCACAGATCAATAAGAAACAAAAGGAAAGAGAGTAAAGTAGGATGTGGGAGATGTGTGTTTGTGGATGTGGATATGGATAAGGTGATATGCC
TTGGACCAATTATAATCTAACATTTTGATTCATTCTCCTACCCACACCTCTTATTCATCTATTCGCTATACCTACAACAATTCCAA