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Detailed information on CNT30174623


BLAST search results

BLAST vs Swiss-Prot:
sp|P32869|PSAD_CUCSA, E-value = 1e-57

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Vigna angularisOryza sativa30.433.8181.08259forward
CNT30678303Vigna angularisSetaria viridis11.2726.9788.5496forward
CNT30522020Vigna angularisSetaria italica20.8937.5583.15178forward
CNT30639185Vigna angularisNymphaea colorata20.3140.5283.82173forward
CNT30315306Vigna angularisCorylus avellana15.7322.1182.84134forward
CNT30515464Vigna angularisJuglans regia30.6323.5185.06261forward
CNT30371945Vigna angularisArabidopsis thaliana11.7423.2686100forward
CNT30380094Vigna angularisManihot esculenta30.6324.1780.84261forward
CNT30525887Vigna angularisPhaseolus vulgaris15.9636.3691.91136forward
CNT30630888Vigna angularisVigna unguiculata71.0189.3694.88605forward
CNT30488386Vigna angularisOlea europaea17.4920.2283.22149forward
CNT30710333Vigna angularisGlycine max32.5131.8489.53277forward
CNT3094391Vigna angularisSolanum tuberosum23.3645.5481.41199forward
CNT30299761Vigna angularisTriticum aestivum11.2724.6886.4696forward
CNT3089114Vigna angularisVigna radiata42.0237.2196.09358forward
CNT30554655Vigna angularisOryza glaberrima30.429.681.08259forward
CNT30145740Vigna angularisMedicago truncatula26.8828.4582.97229forward
CNT30439932Vigna angularisAegilops tauschii11.2723.1986.4696forward
CNT30249254Vigna angularisAvena sativa20.7724.4881.92177forward
CNT30262Vigna angularisZea mays16.3127.881.29139forward
CNT30228866Vigna angularisAnanas comosus21.7121.1781.62185forward
CNT30651207Vigna angularisRosa chinensis27.734.8686.02236forward
CNT30361538Vigna angularisSorghum bicolor12.7922.4781.65109forward
CNT30619829Vigna angularisCajanus cajan32.7528.391.04279forward
CNT30596794Vigna angularisOryza meridionalis30.439.0680.69259forward
CNT30356274Vigna angularisLactuca sativa31.3440.9583.52267forward
CNT30370811Vigna angularisOryza glumipatula30.432.7481.08259forward
CNT30410573Vigna angularisPapaver somniferum23.1221.9184.77197forward
CNT30570681Vigna angularisVitis vinifera32.2820.1285.09275forward
CNT30148202Vigna angularisBrachypodium distachyon20.7732.4879.66177forward
CNT30577354Vigna angularisOryza barthii30.431.5181.08259forward
CNT30579362Vigna angularisEchinochloa crusgalli30.429.781.08259forward
CNT30499040Vigna angularisDigitaria exilis21.3626.7684.07182forward
CNT30117312Vigna angularisOryza nivara30.432.8781.08259forward
CNT30113105Vigna angularisFicus carica32.5134.6284.48277forward
CNT30724196Vigna angularisLupinus angustifolius27.1127.7685.28231forward

Expression of CNT30174623

Peptides detected in this lncRNA

>peptide 1 (35 aa)
YVRCYYFVIGLIKLKQINIPKDVDDSNDKTILKRE*

Sequence

>CNT30174623
GATATGTCCGGTGTTATTACTTTGTTATAGGTTTGATCAAGTTGAAGCAAATCAATATTCCAAAAGATGTTGACGACAGTAACGATAAAACAATACTAAA
GAGAGAATAGGAGAAAAATAGCTATAAAATTAAGGCACATGAGTTTAGCATTTGTGGCATAAATTTGACAATATAAGTACAGAGCATATAGGAGGAATGA
AGGAGGTGGTGCTTACAAATCATATGGTTGCTTGCCGGTGAACTTGACCTCGATGGGATTAACATTCTTACCAATAGACCTGAAGTTTTGGCCAACCCCT
TGGCGTCCCGGGTTGACCTTCTCAGGGTAGACACCATCCTTGGGGTGCAAGTACTGAACTTCTCCGTTGGGGAAGACCCTGTAGAACTGGTAATTGATCT
TGTACTTTGACCTCAGTCTAGTTCCAAGAGCCAAACACTGTTCCTTCCTGGCCAACTTCAACAGGTTGGGACCCTCCCTCATGATGGCGTGTTTGGGTCC
AGTTCCGGTGGGGTGAACCCAACGGGTGCCTCTTTTGTTACGGCCTCTGCGGTTTCATCGGCCGCTGCAGCTCTGATTGTCTTGGAGAACTTGAGGGGCT
TCGGAGAGGAGAAGGAGAAGGTGGGGGATTGCTTCCATGGCACGGAGACACGGTCGGTGGGTTTGAGAGCAGAGAAGGAAGGGCTGAAGAGGGAGGCTTG
GGTTGCCATGGCCATGCTGAGAAGGGTTGGGTTGTTGTTGTGTTGTGAGAGATCAGTGAAAAACAAAAGAAAAGAGATGAAAGAAGTATAGGATGGAGAA
GATTTTGGATGGGTTGTGTGGATTTGGATATGGATAAGTGGATATGGTTTCC