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Detailed information on CNT30630495


BLAST search results

BLAST vs Swiss-Prot:
sp|P12372|PSAD_SOLLC, E-value = 3e-81

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Vigna unguiculataOryza sativa52.7339.0381.61299forward
CNT30677834Vigna unguiculataSetaria viridis28.433.9781.99161forward
CNT30522550Vigna unguiculataSetaria italica45.3353.9980.54257forward
CNT30639185Vigna unguiculataNymphaea colorata54.8572.8382.96311forward
CNT30515273Vigna unguiculataJuglans regia52.0346.0283.39295forward
CNT30371945Vigna unguiculataArabidopsis thaliana33.6944.4281.68191forward
CNT30269143Vigna unguiculataChenopodium quinoa43.0331.479.51244forward
CNT30380725Vigna unguiculataManihot esculenta50.9748.9881.66289forward
CNT30403648Vigna unguiculataBeta vulgaris40.5620.7483.91230forward
CNT30525887Vigna unguiculataPhaseolus vulgaris67.9102.9488.83385forward
CNT30197643Vigna unguiculataPisum sativum14.8137.8485.7184forward
CNT30505774Vigna unguiculataNicotiana attenuata40.3947.9182.97229forward
CNT30298930Vigna unguiculataTriticum aestivum25.7517.5780.82146forward
CNT30393705Vigna unguiculataTriticum turgidum25.7516.0480.82146forward
CNT3089114Vigna unguiculataVigna radiata70.1941.3794.72398forward
CNT30554655Vigna unguiculataOryza glaberrima52.7334.1781.61299forward
CNT30171560Vigna unguiculataTrifolium pratense54.8538.5981.03311forward
CNT30440464Vigna unguiculataAegilops tauschii25.7517.5980.82146forward
CNT30246994Vigna unguiculataAvena sativa26.9818.3281.7153forward
CNT30666088Vigna unguiculataTriticum dicoccoides25.7518.280.82146forward
CNT3061459Vigna unguiculataArabidopsis lyrata42.3340.9679.58240forward
CNT30446699Vigna unguiculataSaccharum spontaneum28.9218.2881.1164forward
CNT30971Vigna unguiculataZea mays45.8645.6180.38260forward
CNT30651308Vigna unguiculataRosa chinensis39.3338.7284.75223forward
CNT30344027Vigna unguiculataEragrostis tef49.5634.7879.36281forward
CNT30477824Vigna unguiculataArabidopsis halleri32.855.8680.65186forward
CNT30361538Vigna unguiculataSorghum bicolor43.3950.7280.08246forward
CNT30619829Vigna unguiculataCajanus cajan61.0235.0989.02346forward
CNT30596768Vigna unguiculataOryza meridionalis33.6924.3982.2191forward
CNT30358483Vigna unguiculataLactuca sativa57.549.8582.82326forward
CNT30370811Vigna unguiculataOryza glumipatula52.7337.881.61299forward
CNT30411270Vigna unguiculataPapaver somniferum50.6251.1681.53287forward
CNT30577354Vigna unguiculataOryza barthii52.7336.3781.61299forward
CNT30579362Vigna unguiculataEchinochloa crusgalli52.7334.2979.93299forward
CNT30117312Vigna unguiculataOryza nivara52.7337.9481.61299forward
CNT3049718Vigna unguiculataCucumis sativus53.6258.2479.28304forward

Expression of CNT30630495

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAMGKCSRRFEKLLCCERSVRNKRKESKEV*

Sequence

>CNT30630495
TAGACACCATCCTTGGGATGCAAGTACTGAACTTCTCCATTGGGGAAGACCCTGTAGAACTGGTAATTGATCTTGTACTTTGACCTGAGTCTAGTTCCAA
GAGCCAAACACTGTTCCTTCCTGGCCAACTTCAACAGGTTGGGACCCTCCCTCATGATGGCAGCACCTCCGGTGGGCATTTCAAAGATCTGTTCTTTGGG
GGATTGCCATGTGATCACATAGAACTCCTCCACCTGGGCCTTCCTCAAAAGCCCACCGGTGCTGCCTCCGAAGATCGGGGAAGGCGTGTTTGGGTCCAGT
TCCGGTGGGGTGAACCCAACCGGTGCCTCTTTTGTTACGGCCTCTGCGGCGGTTTCATCGCCCGCTGCAGCTCTGACTGTCTTCGACAACTTGAGGGGCT
TCGCAGAGGGGAAGGAGAAGGGTGGGGTGAAGAGGGAGGCTTGGGTTGCCATGGCCATGGGTAAGTGCAGCAGAAGGTTTGAGAAGTTGTTGTGTTGTGA
GAGATCAGTGAGAAACAAAAGAAAAGAGAGTAAAGAAGTATAGGATGGAGGAGATTTTCGATGGGTG