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Detailed information on CNT30344027


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 7e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30695521Eragrostis tefOryza sativa49.6352.3593.52401forward
CNT30678303Eragrostis tefSetaria viridis23.8954.2196.37193forward
CNT30522020Eragrostis tefSetaria italica34.6559.0795.71280forward
CNT30639185Eragrostis tefNymphaea colorata35.8967.9282.76290forward
CNT30517240Eragrostis tefJuglans regia11.3930.4684.7892forward
CNT30525887Eragrostis tefPhaseolus vulgaris9.921.3986.2580forward
CNT30630495Eragrostis tefVigna unguiculata34.7849.5679.36281forward
CNT30710333Eragrostis tefGlycine max36.6334.0281.76296forward
CNT30299532Eragrostis tefTriticum aestivum30.3248.0493.88245forward
CNT30395090Eragrostis tefTriticum turgidum48.8936.7492.66395forward
CNT3089114Eragrostis tefVigna radiata31.3126.380.63253forward
CNT30554655Eragrostis tefOryza glaberrima49.6345.8393.52401forward
CNT30440464Eragrostis tefAegilops tauschii48.8947.5992.66395forward
CNT30246994Eragrostis tefAvena sativa48.0246.4793.04388forward
CNT30665756Eragrostis tefTriticum dicoccoides44.0650.1493.26356forward
CNT30446699Eragrostis tefSaccharum spontaneum27.9725.295.13226forward
CNT3010182Eragrostis tefZea mays32.833.7694.72265forward
CNT30228866Eragrostis tefAnanas comosus29.0826.8987.23235forward
CNT30651308Eragrostis tefRosa chinensis15.2221.3582.11123forward
CNT30361538Eragrostis tefSorghum bicolor30.250.3194.26244forward
CNT30619829Eragrostis tefCajanus cajan37.8731.0382.68306forward
CNT30596794Eragrostis tefOryza meridionalis35.8943.7494.14290forward
CNT30358694Eragrostis tefLactuca sativa15.2227.6482.93123forward
CNT30370811Eragrostis tefOryza glumipatula49.6350.793.52401forward
CNT30148662Eragrostis tefBrachypodium distachyon40.9742.9992.15331forward
CNT30577354Eragrostis tefOryza barthii49.6348.7893.52401forward
CNT30579362Eragrostis tefEchinochloa crusgalli49.3845.7694.49399forward
CNT30499040Eragrostis tefDigitaria exilis26.7331.7691.67216forward
CNT30117312Eragrostis tefOryza nivara49.6350.8993.52401forward
CNT30113105Eragrostis tefFicus carica37.623885.86304forward

Expression of CNT30344027

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MQATCLINVPSPKSPNEHVHIINHMHHHQNDHESVALKLHTDRSTHPGT*

>peptide 2 (55 aa)
MGDGVFGWDERGLLAGDQAAARRWRVAAEAWVAMAMCLCTCFLQARATKQAGGDRV

Sequence

>CNT30344027
CTGATACTTGCTCTGTTAGAGATAAATCACGCAGTAGCAAATTAAATTAAGTAGCAATCCTGTTGTGTCATATGCAAGCAACGTGTTTAATTAACGTACC
ATCGCCAAAAAGCCCAAATGAACATGTACATATAATTAATCACATGCACCACCACCAAAATGATCACGAAAGTGTTGCATTAAAATTACATACGGATCGG
TCCACGCACCCCGGCACCTAACAAGATCAGATAAAACTTGTGGATCATCGATCATATGTCGAAGACGTTCTTGCCGGTGAACTTGACCTCGATGGGGCTG
ACGTTCTTGCCGATGCTGCGGTAGTTCTGCCCGACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTACACGCCGTCCTTGGGGTGGAGGTACTGCACCT
CGCCGTTGGGGAAGACGCGGTAGAACTGGTAGTTGATCTTGTACTTTGAGCGCAGCCTGGTGCCGAGCGCGAGGCACTGCTCCTTGCGCGCCAGCTTGAG
CAGGTTGGGCCCCTCACGCATGATGGCCGCGCCGCCCGTGGGCATCTCGAACACCTGCTCCTTGGGCGACGTCCACGTGATGACGTAGAACTCCTCCACC
TGGGCCTTGCGCAGCAGCCCGCCCGTGCTGCCGCCGAAGATGGGCGACGGCGTGTTCGGCTGGGACGAGCGCGGCTTGTTGGCCGGCGACCAGGCGGCCG
CCAGGAGGTGGCGCGTCGCGGCGGAGGCTTGGGTGGCCATGGCCATGTGCTTGTGTACCTGTTTCTTGCAGGCGCGAGCGACCAAGCAAGCAGGCGGTGA
CCGAGTGA